Literature DB >> 19662335

Characterization of slow conformational dynamics in solids: dipolar CODEX.

Wenbo Li1, Ann E McDermott.   

Abstract

A solid state NMR experiment is introduced for probing relatively slow conformational exchange, based on dephasing and refocusing dipolar couplings. The method is closely related to the previously described Centerband-Only Detection of Exchange or CODEX experiment. The use of dipolar couplings for this application is advantageous because their values are known a priori from molecular structures, and their orientations and reorientations relate in a simple way to molecular geometry and motion. Furthermore the use of dipolar couplings in conjunction with selective isotopic enrichment schemes is consistent with selection for unique sites in complex biopolymers. We used this experiment to probe the correlation time for the motion of (13)C, (15)N enriched urea molecules within their crystalline lattice.

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Year:  2009        PMID: 19662335     DOI: 10.1007/s10858-009-9353-8

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  6 in total

Review 1.  The way things move: looking under the hood of molecular motor proteins.

Authors:  R D Vale; R A Milligan
Journal:  Science       Date:  2000-04-07       Impact factor: 47.728

2.  SPINEVOLUTION: a powerful tool for the simulation of solid and liquid state NMR experiments.

Authors:  Mikhail Veshtort; Robert G Griffin
Journal:  J Magn Reson       Date:  2005-12-07       Impact factor: 2.229

3.  CONTRA: improving the performance of dynamic investigations in natural abundance organic solids by mirror-symmetric constant-time CODEX.

Authors:  Detlef Reichert; Ovidiu Pascui; Tito J Bonagamba; Peter Belton; Asher Schmidt; Eduardo Ribeiro deAzevedo
Journal:  J Magn Reson       Date:  2007-11-06       Impact factor: 2.229

Review 4.  A perspective on enzyme catalysis.

Authors:  Stephen J Benkovic; Sharon Hammes-Schiffer
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

5.  Direct observation of the rotation of F1-ATPase.

Authors:  H Noji; R Yasuda; M Yoshida; K Kinosita
Journal:  Nature       Date:  1997-03-20       Impact factor: 49.962

6.  Methods for sequential resonance assignment in solid, uniformly 13C, 15N labelled peptides: quantification and application to antamanide.

Authors:  A Detken; E H Hardy; M Ernst; M Kainosho; T Kawakami; S Aimoto; B H Meier
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

  6 in total
  6 in total

Review 1.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

Review 2.  An introduction to NMR-based approaches for measuring protein dynamics.

Authors:  Ian R Kleckner; Mark P Foster
Journal:  Biochim Biophys Acta       Date:  2010-11-06

3.  Investigation of slow molecular dynamics using R-CODEX.

Authors:  Wenbo Li; Ann McDermott
Journal:  J Magn Reson       Date:  2012-06-07       Impact factor: 2.229

4.  Quantifying conformational dynamics using solid-state R₁ρ experiments.

Authors:  Caitlin M Quinn; Ann E McDermott
Journal:  J Magn Reson       Date:  2012-05-29       Impact factor: 2.229

5.  Solid-State NMR Provides Evidence for Small-Amplitude Slow Domain Motions in a Multispanning Transmembrane α-Helical Protein.

Authors:  Daryl Good; Charlie Pham; Jacob Jagas; Józef R Lewandowski; Vladimir Ladizhansky
Journal:  J Am Chem Soc       Date:  2017-06-30       Impact factor: 15.419

6.  A topical issue: NMR investigations of molecular dynamics.

Authors:  Arthur G Palmer
Journal:  J Biomol NMR       Date:  2009-09       Impact factor: 2.835

  6 in total

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