Literature DB >> 22241823

Direct fluorescence monitoring of DNA base excision repair.

Toshikazu Ono1, Shenliang Wang, Chi-Kin Koo, Lisa Engstrom, Sheila S David, Eric T Kool.   

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Year:  2012        PMID： 22241823      PMCID： PMC3528074          DOI： 10.1002/anie.201108135

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  33 in total

1.  Selective and Stable DNA Base Pairing without Hydrogen Bonds.

Authors:  Tracy J Matray; Eric T Kool
Journal:  J Am Chem Soc       Date:  1998       Impact factor: 15.419

2.  Excimer formation by interstrand stacked pyrenes.

Authors:  Simon M Langenegger; Robert Häner
Journal:  Chem Commun (Camb)       Date:  2004-11-09       Impact factor: 6.222

3.  Probing the B-to-Z-DNA duplex transition using terminally stacking ethynyl pyrene-modified adenosine and uridine bases.

Authors:  Young Jun Seo; Byeang Hyean Kim
Journal:  Chem Commun (Camb)       Date:  2005-11-16       Impact factor: 6.222

4.  Probing DNA sequences in solution with a monomer-excimer fluorescence color change.

Authors:  P L Paris; J M Langenhan; E T Kool
Journal:  Nucleic Acids Res       Date:  1998-08-15       Impact factor: 16.971

5.  DNA-polyfluorophore excimers as sensitive reporters for esterases and lipases.

Authors:  Nan Dai; Yin Nah Teo; Eric T Kool
Journal:  Chem Commun (Camb)       Date:  2010-01-22       Impact factor: 6.222

6.  Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus.

Authors:  M Sandigursky; W A Franklin
Journal:  J Biol Chem       Date:  2000-06-23       Impact factor: 5.157

7.  Turning On uracil-DNA glycosylase using a pyrene nucleotide switch.

Authors:  Y L Jiang; K Kwon; J T Stivers
Journal:  J Biol Chem       Date:  2001-09-10       Impact factor: 5.157

Review 8.  Structure and function in the uracil-DNA glycosylase superfamily.

Authors:  L H Pearl
Journal:  Mutat Res       Date:  2000-08-30       Impact factor: 2.433

9.  Base-flipping mutations of uracil DNA glycosylase: substrate rescue using a pyrene nucleotide wedge.

Authors:  Yu Lin Jiang; James T Stivers; Fenhong Song
Journal:  Biochemistry       Date:  2002-09-17       Impact factor: 3.162

10.  Electron injection into DNA: synthesis and spectroscopic properties of pyrenyl-modified oligonucleotides.

Authors:  Nicole Amann; Evgeni Pandurski; Torsten Fiebig; Hans-Achim Wagenknecht
Journal:  Chemistry       Date:  2002-11-04       Impact factor: 5.236
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  11 in total

1.  Synthesis of Site-Specific Crown Ether Adducts to DNA Abasic Sites: 8-Oxo-7,8-Dihydro-2'-Deoxyguanosine and 2'-Deoxycytidine.

Authors:  Na An; Aaron M Fleming; Nicole C Rosecrans; Yi Liao; Cynthia J Burrows
Journal:  Methods Mol Biol       Date:  2019

2.  Synthesis of 5-Dihydroxyboryluridine Phosphoramidite and Its Site-Specific Incorporation into Oligonucleotides for Probing Thymine DNA Glycosylase.

Authors:  Sam Kavoosi; Debasis Dey; Kabirul Islam
Journal:  Org Lett       Date:  2019-08-26       Impact factor: 6.005

3.  In Vitro Fluorogenic Real-Time Assay of the Repair of Oxidative DNA Damage.

Authors:  Sarah K Edwards; Toshikazu Ono; Shenliang Wang; Wei Jiang; Raphael M Franzini; Jong Wha Jung; Ke Min Chan; Eric T Kool
Journal:  Chembiochem       Date:  2015-06-12       Impact factor: 3.164

4.  Fluorescence Monitoring of the Oxidative Repair of DNA Alkylation Damage by ALKBH3, a Prostate Cancer Marker.

Authors:  Andrew A Beharry; Sandrine Lacoste; Timothy R O'Connor; Eric T Kool
Journal:  J Am Chem Soc       Date:  2016-03-15       Impact factor: 15.419

5.  Expanding targets of DNAzyme-based sensors through deactivation and activation of DNAzymes by single uracil removal: sensitive fluorescent assay of uracil-DNA glycosylase.

Authors:  Yu Xiang; Yi Lu
Journal:  Anal Chem       Date:  2012-10-29       Impact factor: 6.986

6.  Selective fluorogenic chemosensors for distinct classes of nucleases.

Authors:  Jong-Wha Jung; Sarah K Edwards; Eric T Kool
Journal:  Chembiochem       Date:  2013-02-01       Impact factor: 3.164

Review 7.  Fluorescent Probes of DNA Repair.

Authors:  David L Wilson; Eric T Kool
Journal:  ACS Chem Biol       Date:  2017-11-30       Impact factor: 5.100

8.  New environment-sensitive multichannel DNA fluorescent label for investigation of the protein-DNA interactions.

Authors:  Alexandra A Kuznetsova; Nikita A Kuznetsov; Yuri N Vorobjev; Nicolas P F Barthes; Benoît Y Michel; Alain Burger; Olga S Fedorova
Journal:  PLoS One       Date:  2014-06-12       Impact factor: 3.240

Review 9.  Recent Advances in Nucleic Acid Targeting Probes and Supramolecular Constructs Based on Pyrene-Modified Oligonucleotides.

Authors:  Olga A Krasheninina; Darya S Novopashina; Evgeny K Apartsin; Alya G Venyaminova
Journal:  Molecules       Date:  2017-11-30       Impact factor: 4.411

10.  Monitoring eukaryotic and bacterial UDG repair activity with DNA-multifluorophore sensors.

Authors:  Toshikazu Ono; Sarah K Edwards; Shenliang Wang; Wei Jiang; Eric T Kool
Journal:  Nucleic Acids Res       Date:  2013-05-03       Impact factor: 16.971
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