| Literature DB >> 22219867 |
Abstract
In the title salt, C(8)H(6)F(3)N(2) (+)·ClO(4) (-), the atoms of the benzimidazole ring (including H atoms) are nearly coplanar (r.m.s. deviation of the fitted atoms = 0.0122 Å) and the triflouromethyl group lies out of this plane. The perchlorate anion adopts a distorted tetra-hedral conformation with the Cl-O bond distances ranging from 1.412 (3) to 1.439 (2) Å. The benzimidazolium cations are linked to adjacent anions by inter-molecular N-H⋯O hydrogen bonds, forming chains.Entities:
Year: 2011 PMID: 22219867 PMCID: PMC3247562 DOI: 10.1107/S1600536811039298
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H6F3N2+·ClO4− | |
| Triclinic, | |
| Hall symbol: -P 1 | |
| Mo | |
| θ = 3.4–26° | |
| µ = 0.40 mm−1 | |
| α = 61.80 (3)° | |
| β = 81.98 (3)° | Block, colourless |
| γ = 75.85 (3)° | 0.36 × 0.32 × 0.28 mm |
| Rigaku Mercury2 diffractometer | 2535 independent reflections |
| Radiation source: fine-focus sealed tube | 1980 reflections with |
| graphite | |
| CCD_Profile_fitting scans | θmax = 27.5°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 5756 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2535 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.49 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| F1 | 0.3287 (4) | 0.0295 (2) | 0.1487 (2) | 0.0793 (7) | |
| F2 | 0.4027 (3) | 0.2471 (3) | −0.0564 (2) | 0.0697 (6) | |
| F3 | 0.1269 (3) | 0.2305 (3) | −0.0094 (3) | 0.0791 (7) | |
| N1 | 0.2447 (3) | 0.4517 (3) | 0.1052 (3) | 0.0430 (5) | |
| H1A | 0.2375 | 0.5249 | 0.0045 | 0.052* | |
| N2 | 0.2695 (3) | 0.2099 (3) | 0.3226 (2) | 0.0379 (5) | |
| H2A | 0.2802 | 0.1020 | 0.3852 | 0.046* | |
| C1 | 0.2548 (3) | 0.3343 (3) | 0.3721 (3) | 0.0374 (5) | |
| C2 | 0.2378 (4) | 0.4892 (3) | 0.2328 (3) | 0.0395 (6) | |
| C3 | 0.2214 (4) | 0.6432 (4) | 0.2384 (4) | 0.0534 (7) | |
| H3 | 0.2090 | 0.7476 | 0.1453 | 0.064* | |
| C4 | 0.2248 (5) | 0.6313 (4) | 0.3883 (4) | 0.0603 (8) | |
| H4 | 0.2148 | 0.7308 | 0.3976 | 0.072* | |
| C5 | 0.2429 (5) | 0.4748 (4) | 0.5284 (4) | 0.0593 (8) | |
| H5 | 0.2448 | 0.4737 | 0.6277 | 0.071* | |
| C6 | 0.2577 (4) | 0.3237 (4) | 0.5248 (3) | 0.0510 (7) | |
| H6 | 0.2691 | 0.2199 | 0.6185 | 0.061* | |
| C7 | 0.2639 (3) | 0.2848 (3) | 0.1636 (3) | 0.0376 (5) | |
| C8 | 0.2812 (4) | 0.1957 (4) | 0.0614 (3) | 0.0483 (7) | |
| Cl1 | 0.21788 (9) | 0.83165 (8) | −0.28977 (7) | 0.0426 (2) | |
| O1 | 0.3244 (3) | 0.8661 (3) | −0.4364 (2) | 0.0571 (6) | |
| O2 | 0.1589 (4) | 0.6730 (3) | −0.2310 (3) | 0.0692 (7) | |
| O3 | 0.3197 (4) | 0.8220 (5) | −0.1699 (3) | 0.0965 (10) | |
| O4 | 0.0612 (4) | 0.9641 (3) | −0.3218 (3) | 0.0806 (8) |
| F1 | 0.131 (2) | 0.0469 (11) | 0.0617 (12) | −0.0124 (11) | −0.0017 (12) | −0.0287 (9) |
| F2 | 0.0740 (13) | 0.0940 (15) | 0.0507 (10) | −0.0281 (11) | 0.0205 (9) | −0.0414 (10) |
| F3 | 0.0649 (12) | 0.1233 (19) | 0.0777 (14) | −0.0174 (12) | −0.0104 (10) | −0.0676 (14) |
| N1 | 0.0551 (13) | 0.0378 (11) | 0.0265 (10) | −0.0127 (10) | 0.0002 (9) | −0.0058 (9) |
| N2 | 0.0466 (12) | 0.0319 (10) | 0.0273 (10) | −0.0068 (9) | −0.0029 (9) | −0.0071 (8) |
| C1 | 0.0396 (13) | 0.0364 (13) | 0.0318 (12) | −0.0081 (10) | −0.0015 (10) | −0.0118 (10) |
| C2 | 0.0442 (14) | 0.0383 (13) | 0.0316 (12) | −0.0115 (11) | −0.0005 (10) | −0.0112 (10) |
| C3 | 0.068 (2) | 0.0385 (14) | 0.0502 (17) | −0.0166 (14) | −0.0008 (14) | −0.0149 (13) |
| C4 | 0.076 (2) | 0.0521 (18) | 0.065 (2) | −0.0212 (16) | 0.0012 (17) | −0.0337 (16) |
| C5 | 0.076 (2) | 0.068 (2) | 0.0453 (16) | −0.0156 (17) | −0.0024 (15) | −0.0339 (16) |
| C6 | 0.0646 (18) | 0.0515 (16) | 0.0323 (13) | −0.0109 (14) | −0.0049 (12) | −0.0149 (12) |
| C7 | 0.0389 (13) | 0.0394 (13) | 0.0291 (12) | −0.0098 (10) | 0.0010 (10) | −0.0111 (10) |
| C8 | 0.0560 (17) | 0.0536 (16) | 0.0374 (14) | −0.0143 (13) | 0.0025 (12) | −0.0219 (13) |
| Cl1 | 0.0500 (4) | 0.0392 (3) | 0.0302 (3) | −0.0106 (3) | −0.0028 (2) | −0.0079 (2) |
| O1 | 0.0636 (13) | 0.0512 (12) | 0.0351 (10) | −0.0059 (10) | 0.0047 (9) | −0.0067 (9) |
| O2 | 0.0965 (18) | 0.0503 (13) | 0.0569 (14) | −0.0310 (12) | 0.0130 (13) | −0.0178 (11) |
| O3 | 0.091 (2) | 0.158 (3) | 0.0524 (14) | −0.057 (2) | −0.0063 (14) | −0.0410 (17) |
| O4 | 0.0728 (16) | 0.0586 (15) | 0.0820 (18) | 0.0036 (12) | 0.0105 (14) | −0.0207 (13) |
| F1—C8 | 1.312 (4) | C3—C4 | 1.363 (4) |
| F2—C8 | 1.317 (3) | C3—H3 | 0.9300 |
| F3—C8 | 1.328 (4) | C4—C5 | 1.397 (5) |
| N1—C7 | 1.318 (3) | C4—H4 | 0.9300 |
| N1—C2 | 1.382 (3) | C5—C6 | 1.362 (4) |
| N1—H1A | 0.86 | C5—H5 | 0.9300 |
| N2—C7 | 1.318 (3) | C6—H6 | 0.9300 |
| N2—C1 | 1.385 (3) | C7—C8 | 1.495 (4) |
| N2—H2A | 0.86 | Cl1—O3 | 1.412 (3) |
| C1—C2 | 1.385 (3) | Cl1—O4 | 1.420 (3) |
| C1—C6 | 1.393 (4) | Cl1—O1 | 1.434 (2) |
| C2—C3 | 1.395 (4) | Cl1—O2 | 1.439 (2) |
| C7—N1—C2 | 108.6 (2) | C4—C5—H5 | 118.8 |
| C7—N1—H1A | 125.7 | C5—C6—C1 | 115.8 (3) |
| C2—N1—H1A | 125.8 | C5—C6—H6 | 122.1 |
| C7—N2—C1 | 108.5 (2) | C1—C6—H6 | 122.1 |
| C7—N2—H2A | 125.8 | N2—C7—N1 | 110.3 (2) |
| C1—N2—H2A | 125.7 | N2—C7—C8 | 125.6 (2) |
| N2—C1—C2 | 106.3 (2) | N1—C7—C8 | 124.1 (2) |
| N2—C1—C6 | 131.7 (2) | F1—C8—F2 | 108.7 (3) |
| C2—C1—C6 | 121.9 (3) | F1—C8—F3 | 108.6 (3) |
| N1—C2—C1 | 106.3 (2) | F2—C8—F3 | 106.2 (2) |
| N1—C2—C3 | 132.0 (2) | F1—C8—C7 | 110.7 (2) |
| C1—C2—C3 | 121.6 (3) | F2—C8—C7 | 111.0 (2) |
| C4—C3—C2 | 116.0 (3) | F3—C8—C7 | 111.4 (2) |
| C4—C3—H3 | 122.0 | O3—Cl1—O4 | 110.0 (2) |
| C2—C3—H3 | 122.0 | O3—Cl1—O1 | 110.25 (16) |
| C3—C4—C5 | 122.2 (3) | O4—Cl1—O1 | 109.06 (15) |
| C3—C4—H4 | 118.9 | O3—Cl1—O2 | 109.08 (18) |
| C5—C4—H4 | 118.9 | O4—Cl1—O2 | 107.71 (17) |
| C6—C5—C4 | 122.4 (3) | O1—Cl1—O2 | 110.65 (15) |
| C6—C5—H5 | 118.8 | ||
| C7—N2—C1—C2 | 0.7 (3) | N2—C1—C6—C5 | 178.7 (3) |
| C7—N2—C1—C6 | −178.2 (3) | C2—C1—C6—C5 | 0.0 (4) |
| C7—N1—C2—C1 | 0.2 (3) | C1—N2—C7—N1 | −0.6 (3) |
| C7—N1—C2—C3 | 179.0 (3) | C1—N2—C7—C8 | 178.0 (2) |
| N2—C1—C2—N1 | −0.5 (3) | C2—N1—C7—N2 | 0.2 (3) |
| C6—C1—C2—N1 | 178.5 (3) | C2—N1—C7—C8 | −178.4 (2) |
| N2—C1—C2—C3 | −179.4 (2) | N2—C7—C8—F1 | −9.0 (4) |
| C6—C1—C2—C3 | −0.5 (4) | N1—C7—C8—F1 | 169.4 (3) |
| N1—C2—C3—C4 | −178.0 (3) | N2—C7—C8—F2 | −129.8 (3) |
| C1—C2—C3—C4 | 0.6 (4) | N1—C7—C8—F2 | 48.6 (4) |
| C2—C3—C4—C5 | −0.2 (5) | N2—C7—C8—F3 | 112.1 (3) |
| C3—C4—C5—C6 | −0.2 (6) | N1—C7—C8—F3 | −69.5 (3) |
| C4—C5—C6—C1 | 0.3 (5) |
| H··· | ||||
| N1—H1A···O2 | 0.86 | 2.05 | 2.891 (3) | 164 |
| N1—H1A···O3 | 0.86 | 2.59 | 3.254 (4) | 135 |
| N2—H2A···O1i | 0.86 | 1.98 | 2.822 (3) | 167 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.05 | 2.891 (3) | 164 |
| N1—H1 | 0.86 | 2.59 | 3.254 (4) | 135 |
| N2—H2 | 0.86 | 1.98 | 2.822 (3) | 167 |
Symmetry code: (i) .