| Literature DB >> 22719284 |
Abstract
In the title compound, (C(8)H(6)F(3)N(2))(2)[HgCl(4)]·2H(2)O, the Hg(II) cation is coordinated by four Cl(-) anions in a distorted tetra-hedral geometry. In the crystal, the 2-trifluoro-methyl-1H-benzimidazolium cations link to the [HgCl(4)](2-) complex anions and lattice water mol-ecules via N-H⋯Cl and N-H⋯O hydrogen bonds, and the lattice water mol-ecules further link to the Hg complex anion and the organic cations via O-H⋯Cl and O-H⋯F hydrogen bonding. One of the trifluoro-methyl groups is disordered over two orientations in a 0.59 (4):0.41 (4) ratio.Entities:
Year: 2012 PMID: 22719284 PMCID: PMC3379063 DOI: 10.1107/S1600536812018855
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C8H6F3N2)2[HgCl4]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4366 reflections | |
| θ = 3.0–26.0° | |
| µ = 6.81 mm−1 | |
| α = 79.40 (3)° | |
| β = 75.79 (3)° | Block, colourless |
| γ = 67.74 (3)° | 0.36 × 0.32 × 0.28 mm |
| Rigaku SCXmini diffractometer | 5564 independent reflections |
| Radiation source: fine-focus sealed tube | 4040 reflections with |
| Graphite monochromator | |
| CCD_Profile_fitting scans | θmax = 27.5°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 12786 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5564 reflections | (Δ/σ)max = 0.022 |
| 326 parameters | Δρmax = 0.57 e Å−3 |
| 9 restraints | Δρmin = −1.28 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| F1 | 0.7017 (13) | 0.721 (2) | 0.7840 (6) | 0.093 (6) | 0.59 (4) |
| F2 | 0.499 (3) | 0.677 (2) | 0.8538 (16) | 0.123 (10) | 0.59 (4) |
| F3 | 0.535 (3) | 0.8571 (9) | 0.8821 (10) | 0.112 (9) | 0.59 (4) |
| F1' | 0.656 (4) | 0.652 (3) | 0.7911 (14) | 0.137 (16) | 0.41 (4) |
| F3' | 0.639 (4) | 0.841 (2) | 0.843 (3) | 0.16 (2) | 0.41 (4) |
| F2' | 0.4537 (9) | 0.751 (3) | 0.8841 (12) | 0.102 (11) | 0.41 (4) |
| N1 | 0.7197 (6) | 0.4910 (6) | 0.9609 (4) | 0.0463 (14) | |
| H1A | 0.6964 | 0.4371 | 0.9319 | 0.056* | |
| N2 | 0.7409 (6) | 0.6807 (6) | 0.9988 (4) | 0.0446 (13) | |
| H2A | 0.7328 | 0.7692 | 0.9978 | 0.053* | |
| C1 | 0.6080 (8) | 0.7210 (7) | 0.8664 (5) | 0.064 (2) | |
| C2 | 0.6894 (8) | 0.6313 (8) | 0.9408 (5) | 0.0446 (16) | |
| C3 | 0.7956 (7) | 0.4460 (7) | 1.0370 (5) | 0.0392 (15) | |
| C4 | 0.8554 (9) | 0.3110 (8) | 1.0833 (5) | 0.0522 (18) | |
| H4 | 0.8479 | 0.2294 | 1.0662 | 0.063* | |
| C5 | 0.9278 (9) | 0.3035 (8) | 1.1571 (5) | 0.0532 (18) | |
| H5 | 0.9701 | 0.2150 | 1.1913 | 0.064* | |
| C6 | 0.9371 (8) | 0.4285 (9) | 1.1801 (5) | 0.0535 (18) | |
| H6 | 0.9860 | 0.4200 | 1.2300 | 0.064* | |
| C7 | 0.8793 (8) | 0.5611 (8) | 1.1340 (5) | 0.0456 (16) | |
| H7 | 0.8871 | 0.6425 | 1.1511 | 0.055* | |
| C8 | 0.8083 (7) | 0.5692 (7) | 1.0604 (5) | 0.0376 (14) | |
| F4 | 0.2353 (11) | 0.1121 (7) | 0.5538 (6) | 0.146 (3) | |
| F5 | 0.3648 (10) | 0.1573 (10) | 0.4248 (7) | 0.167 (4) | |
| F6 | 0.1251 (8) | 0.2625 (7) | 0.4538 (6) | 0.124 (2) | |
| N3 | 0.3498 (7) | 0.3080 (7) | 0.5958 (4) | 0.0579 (16) | |
| H3A | 0.3878 | 0.2271 | 0.6286 | 0.070* | |
| N4 | 0.2323 (7) | 0.4628 (7) | 0.4921 (4) | 0.0526 (15) | |
| H4A | 0.1822 | 0.4993 | 0.4462 | 0.063* | |
| C9 | 0.2500 (13) | 0.2136 (11) | 0.4902 (7) | 0.076 (3) | |
| C10 | 0.2768 (8) | 0.3277 (8) | 0.5263 (5) | 0.0503 (17) | |
| C11 | 0.3561 (8) | 0.4384 (9) | 0.6076 (5) | 0.0516 (18) | |
| C12 | 0.4205 (10) | 0.4786 (14) | 0.6680 (6) | 0.079 (3) | |
| H12 | 0.4753 | 0.4119 | 0.7117 | 0.095* | |
| C13 | 0.3997 (13) | 0.6218 (17) | 0.6601 (8) | 0.097 (4) | |
| H13 | 0.4396 | 0.6534 | 0.7008 | 0.116* | |
| C14 | 0.3236 (14) | 0.7196 (14) | 0.5960 (9) | 0.098 (4) | |
| H14 | 0.3153 | 0.8155 | 0.5935 | 0.117* | |
| C15 | 0.2581 (11) | 0.6842 (10) | 0.5344 (7) | 0.072 (2) | |
| H15 | 0.2037 | 0.7525 | 0.4912 | 0.086* | |
| C16 | 0.2792 (9) | 0.5380 (9) | 0.5415 (5) | 0.0524 (18) | |
| Hg2 | 0.11556 (4) | 0.82505 (3) | 0.24321 (2) | 0.05631 (13) | |
| Cl1 | 0.0685 (3) | 0.6016 (2) | 0.32320 (13) | 0.0606 (5) | |
| Cl2 | 0.3673 (3) | 0.7252 (2) | 0.11954 (14) | 0.0653 (5) | |
| Cl3 | −0.1015 (4) | 0.9354 (3) | 0.1548 (2) | 0.1100 (11) | |
| Cl4 | 0.1746 (4) | 0.9720 (3) | 0.32658 (19) | 0.1004 (9) | |
| O1 | 0.2620 (9) | 0.0518 (6) | 1.0084 (5) | 0.099 (2) | |
| H1C | 0.3067 | 0.0060 | 0.9601 | 0.148* | |
| H1B | 0.2751 | −0.0072 | 1.0576 | 0.148* | |
| O2 | 0.4458 (11) | 0.0872 (10) | 0.7187 (7) | 0.166 (4) | |
| H2B | 0.5002 | 0.0086 | 0.6939 | 0.249* | |
| H2D | 0.3630 | 0.0783 | 0.7558 | 0.249* |
| F1 | 0.066 (7) | 0.132 (15) | 0.054 (7) | −0.020 (8) | −0.006 (5) | 0.016 (7) |
| F2 | 0.085 (14) | 0.187 (19) | 0.124 (17) | −0.076 (13) | −0.071 (14) | 0.047 (14) |
| F3 | 0.130 (16) | 0.066 (9) | 0.099 (9) | 0.029 (8) | −0.054 (10) | 0.000 (7) |
| F1' | 0.11 (3) | 0.20 (3) | 0.055 (12) | 0.015 (19) | −0.030 (13) | −0.034 (13) |
| F3' | 0.15 (3) | 0.16 (3) | 0.21 (4) | −0.10 (2) | −0.13 (3) | 0.13 (3) |
| F2' | 0.041 (8) | 0.17 (3) | 0.056 (9) | −0.001 (11) | −0.007 (7) | 0.001 (12) |
| N1 | 0.040 (3) | 0.054 (4) | 0.053 (3) | −0.023 (3) | −0.011 (3) | −0.007 (3) |
| N2 | 0.037 (3) | 0.032 (3) | 0.061 (4) | −0.011 (2) | −0.009 (3) | 0.001 (3) |
| C1 | 0.060 (6) | 0.069 (6) | 0.057 (5) | −0.020 (5) | −0.013 (4) | 0.007 (5) |
| C2 | 0.031 (4) | 0.050 (4) | 0.050 (4) | −0.016 (3) | −0.002 (3) | −0.002 (3) |
| C3 | 0.031 (3) | 0.037 (4) | 0.047 (4) | −0.011 (3) | −0.001 (3) | −0.009 (3) |
| C4 | 0.046 (4) | 0.048 (4) | 0.067 (5) | −0.024 (4) | −0.005 (4) | −0.007 (4) |
| C5 | 0.053 (5) | 0.047 (4) | 0.054 (4) | −0.017 (4) | −0.008 (4) | 0.004 (4) |
| C6 | 0.037 (4) | 0.069 (5) | 0.054 (4) | −0.022 (4) | −0.002 (3) | −0.005 (4) |
| C7 | 0.039 (4) | 0.051 (4) | 0.050 (4) | −0.019 (3) | −0.002 (3) | −0.016 (3) |
| C8 | 0.028 (3) | 0.039 (3) | 0.045 (4) | −0.014 (3) | 0.002 (3) | −0.006 (3) |
| F4 | 0.238 (10) | 0.076 (4) | 0.153 (6) | −0.092 (5) | −0.050 (6) | 0.011 (4) |
| F5 | 0.130 (6) | 0.189 (8) | 0.213 (9) | −0.090 (6) | 0.056 (6) | −0.144 (7) |
| F6 | 0.119 (5) | 0.108 (5) | 0.188 (7) | −0.048 (4) | −0.078 (5) | −0.035 (5) |
| N3 | 0.041 (4) | 0.063 (4) | 0.059 (4) | −0.012 (3) | −0.014 (3) | 0.013 (3) |
| N4 | 0.057 (4) | 0.065 (4) | 0.044 (3) | −0.031 (3) | −0.017 (3) | 0.005 (3) |
| C9 | 0.078 (7) | 0.074 (6) | 0.085 (7) | −0.035 (5) | −0.005 (6) | −0.022 (6) |
| C10 | 0.037 (4) | 0.054 (4) | 0.055 (4) | −0.014 (3) | −0.010 (3) | 0.003 (4) |
| C11 | 0.038 (4) | 0.080 (5) | 0.040 (4) | −0.027 (4) | −0.006 (3) | 0.002 (4) |
| C12 | 0.047 (5) | 0.137 (10) | 0.056 (5) | −0.038 (6) | 0.000 (4) | −0.015 (6) |
| C13 | 0.080 (8) | 0.163 (13) | 0.074 (7) | −0.069 (8) | 0.011 (6) | −0.055 (8) |
| C14 | 0.100 (9) | 0.119 (9) | 0.101 (8) | −0.078 (8) | 0.019 (7) | −0.040 (8) |
| C15 | 0.065 (6) | 0.079 (6) | 0.075 (6) | −0.037 (5) | −0.003 (5) | −0.008 (5) |
| C16 | 0.044 (4) | 0.067 (5) | 0.054 (4) | −0.032 (4) | −0.004 (4) | −0.007 (4) |
| Hg2 | 0.0667 (2) | 0.0587 (2) | 0.05325 (19) | −0.03158 (16) | −0.01580 (15) | −0.00235 (14) |
| Cl1 | 0.0810 (14) | 0.0633 (12) | 0.0535 (11) | −0.0420 (11) | −0.0290 (10) | 0.0135 (9) |
| Cl2 | 0.0645 (13) | 0.0756 (13) | 0.0635 (12) | −0.0374 (11) | 0.0002 (10) | −0.0144 (11) |
| Cl3 | 0.133 (3) | 0.0746 (16) | 0.155 (3) | −0.0507 (17) | −0.103 (2) | 0.0420 (17) |
| Cl4 | 0.158 (3) | 0.0916 (18) | 0.0906 (17) | −0.0746 (19) | −0.0426 (18) | −0.0120 (15) |
| O1 | 0.142 (7) | 0.050 (3) | 0.112 (5) | −0.033 (4) | −0.048 (5) | 0.006 (4) |
| O2 | 0.122 (7) | 0.135 (7) | 0.152 (8) | 0.018 (6) | −0.038 (6) | 0.076 (7) |
| F1—C1 | 1.308 (2) | N3—C10 | 1.308 (9) |
| F2—C1 | 1.309 (2) | N3—C11 | 1.375 (10) |
| F3—C1 | 1.309 (2) | N3—H3A | 0.8599 |
| F1'—C1 | 1.309 (2) | N4—C10 | 1.300 (9) |
| F3'—C1 | 1.309 (2) | N4—C16 | 1.376 (9) |
| F2'—C1 | 1.309 (2) | N4—H4A | 0.8601 |
| N1—C2 | 1.317 (9) | C9—C10 | 1.469 (11) |
| N1—C3 | 1.386 (8) | C11—C16 | 1.377 (10) |
| N1—H1A | 0.8600 | C11—C12 | 1.374 (12) |
| N2—C2 | 1.318 (8) | C12—C13 | 1.361 (15) |
| N2—C8 | 1.357 (8) | C12—H12 | 0.9300 |
| N2—H2A | 0.8600 | C13—C14 | 1.347 (16) |
| C1—C2 | 1.453 (10) | C13—H13 | 0.9300 |
| C3—C4 | 1.371 (9) | C14—C15 | 1.368 (14) |
| C3—C8 | 1.395 (8) | C14—H14 | 0.9300 |
| C4—C5 | 1.390 (10) | C15—C16 | 1.391 (11) |
| C4—H4 | 0.9300 | C15—H15 | 0.9300 |
| C5—C6 | 1.395 (10) | Hg2—Cl4 | 2.364 (2) |
| C5—H5 | 0.9300 | Hg2—Cl3 | 2.455 (3) |
| C6—C7 | 1.350 (10) | Hg2—Cl1 | 2.4734 (19) |
| C6—H6 | 0.9300 | Hg2—Cl2 | 2.564 (2) |
| C7—C8 | 1.377 (9) | O1—H1C | 0.8500 |
| C7—H7 | 0.9300 | O1—H1B | 0.8500 |
| F4—C9 | 1.274 (11) | O2—H2B | 0.8500 |
| F5—C9 | 1.274 (11) | O2—H2D | 0.8500 |
| F6—C9 | 1.281 (11) | ||
| C2—N1—C3 | 107.7 (6) | N2—C8—C3 | 106.5 (6) |
| C2—N1—H1A | 126.1 | C7—C8—C3 | 120.8 (6) |
| C3—N1—H1A | 126.2 | C10—N3—C11 | 108.6 (6) |
| C2—N2—C8 | 108.9 (6) | C10—N3—H3A | 125.8 |
| C2—N2—H2A | 125.6 | C11—N3—H3A | 125.7 |
| C8—N2—H2A | 125.5 | C10—N4—C16 | 108.4 (6) |
| F1—C1—F2' | 127.4 (10) | C10—N4—H4A | 125.9 |
| F1—C1—F3' | 68.6 (15) | C16—N4—H4A | 125.7 |
| F2'—C1—F3' | 109.5 (15) | F4—C9—F5 | 107.8 (10) |
| F1—C1—F3 | 106.1 (10) | F4—C9—F6 | 107.4 (9) |
| F2'—C1—F3 | 70.4 (12) | F5—C9—F6 | 105.6 (10) |
| F1—C1—F2 | 104.5 (11) | F4—C9—C10 | 112.6 (9) |
| F3'—C1—F2 | 135.0 (11) | F5—C9—C10 | 110.9 (8) |
| F3—C1—F2 | 105.9 (12) | F6—C9—C10 | 112.3 (8) |
| F2'—C1—F1' | 103.1 (16) | N4—C10—N3 | 110.6 (7) |
| F3'—C1—F1' | 107.4 (18) | N4—C10—C9 | 124.1 (8) |
| F3—C1—F1' | 134.0 (13) | N3—C10—C9 | 125.2 (8) |
| F2—C1—F1' | 68.8 (14) | N3—C11—C16 | 105.9 (6) |
| F1—C1—C2 | 113.7 (8) | N3—C11—C12 | 132.9 (9) |
| F2'—C1—C2 | 115.1 (9) | C16—C11—C12 | 121.2 (9) |
| F3'—C1—C2 | 111.0 (9) | C13—C12—C11 | 116.1 (10) |
| F3—C1—C2 | 113.6 (7) | C13—C12—H12 | 121.9 |
| F2—C1—C2 | 112.1 (7) | C11—C12—H12 | 121.9 |
| F1'—C1—C2 | 110.1 (9) | C14—C13—C12 | 122.8 (10) |
| N1—C2—N2 | 110.7 (6) | C14—C13—H13 | 118.6 |
| N1—C2—C1 | 125.2 (6) | C12—C13—H13 | 118.6 |
| N2—C2—C1 | 124.1 (6) | C13—C14—C15 | 123.0 (11) |
| C4—C3—N1 | 130.9 (6) | C13—C14—H14 | 118.5 |
| C4—C3—C8 | 122.9 (6) | C15—C14—H14 | 118.5 |
| N1—C3—C8 | 106.2 (6) | C14—C15—C16 | 114.7 (10) |
| C3—C4—C5 | 116.0 (6) | C14—C15—H15 | 122.6 |
| C3—C4—H4 | 122.0 | C16—C15—H15 | 122.6 |
| C5—C4—H4 | 122.0 | C11—C16—N4 | 106.5 (7) |
| C4—C5—C6 | 120.1 (7) | C11—C16—C15 | 122.1 (8) |
| C4—C5—H5 | 119.9 | N4—C16—C15 | 131.4 (8) |
| C6—C5—H5 | 119.9 | Cl4—Hg2—Cl3 | 119.35 (10) |
| C7—C6—C5 | 123.8 (7) | Cl4—Hg2—Cl1 | 120.36 (8) |
| C7—C6—H6 | 118.1 | Cl3—Hg2—Cl1 | 102.26 (8) |
| C5—C6—H6 | 118.1 | Cl4—Hg2—Cl2 | 105.49 (10) |
| C6—C7—C8 | 116.4 (6) | Cl3—Hg2—Cl2 | 105.13 (11) |
| C6—C7—H7 | 121.8 | Cl1—Hg2—Cl2 | 102.10 (8) |
| C8—C7—H7 | 121.8 | H1C—O1—H1B | 109.5 |
| N2—C8—C7 | 132.7 (6) | H2B—O2—H2D | 109.5 |
| C3—N1—C2—N2 | 0.2 (8) | N1—C3—C8—N2 | 0.0 (7) |
| C3—N1—C2—C1 | −178.8 (6) | C4—C3—C8—C7 | −1.7 (10) |
| C8—N2—C2—N1 | −0.2 (8) | N1—C3—C8—C7 | −179.9 (6) |
| C8—N2—C2—C1 | 178.9 (6) | C16—N4—C10—N3 | 0.3 (8) |
| F1—C1—C2—N1 | −84.6 (15) | C16—N4—C10—C9 | −178.9 (8) |
| F2'—C1—C2—N1 | 75.3 (19) | C11—N3—C10—N4 | −0.9 (9) |
| F3'—C1—C2—N1 | −160 (2) | C11—N3—C10—C9 | 178.3 (8) |
| F3—C1—C2—N1 | 153.8 (14) | F4—C9—C10—N4 | −150.4 (9) |
| F2—C1—C2—N1 | 33.7 (19) | F5—C9—C10—N4 | 88.8 (12) |
| F1'—C1—C2—N1 | −41 (3) | F6—C9—C10—N4 | −29.0 (13) |
| F1—C1—C2—N2 | 96.5 (14) | F4—C9—C10—N3 | 30.4 (13) |
| F2'—C1—C2—N2 | −103.6 (17) | F5—C9—C10—N3 | −90.4 (12) |
| F3'—C1—C2—N2 | 22 (2) | F6—C9—C10—N3 | 151.8 (9) |
| F3—C1—C2—N2 | −25.1 (14) | C10—N3—C11—C16 | 1.1 (8) |
| F2—C1—C2—N2 | −145.2 (16) | C10—N3—C11—C12 | −178.6 (8) |
| F1'—C1—C2—N2 | 140 (2) | N3—C11—C12—C13 | −178.5 (8) |
| C2—N1—C3—C4 | −178.1 (7) | C16—C11—C12—C13 | 1.8 (12) |
| C2—N1—C3—C8 | −0.1 (7) | C11—C12—C13—C14 | −1.4 (15) |
| N1—C3—C4—C5 | 178.9 (7) | C12—C13—C14—C15 | 1.3 (17) |
| C8—C3—C4—C5 | 1.3 (10) | C13—C14—C15—C16 | −1.4 (15) |
| C3—C4—C5—C6 | −0.3 (10) | N3—C11—C16—N4 | −0.9 (8) |
| C4—C5—C6—C7 | −0.2 (11) | C12—C11—C16—N4 | 178.8 (7) |
| C5—C6—C7—C8 | −0.2 (10) | N3—C11—C16—C15 | 178.1 (7) |
| C2—N2—C8—C7 | 180.0 (7) | C12—C11—C16—C15 | −2.2 (12) |
| C2—N2—C8—C3 | 0.1 (7) | C10—N4—C16—C11 | 0.4 (8) |
| C6—C7—C8—N2 | −178.8 (7) | C10—N4—C16—C15 | −178.5 (8) |
| C6—C7—C8—C3 | 1.1 (9) | C14—C15—C16—C11 | 1.9 (12) |
| C4—C3—C8—N2 | 178.2 (6) | C14—C15—C16—N4 | −179.5 (8) |
| H··· | ||||
| N1—H1 | 0.86 | 2.23 | 3.081 (6) | 170 |
| N2—H2 | 0.86 | 1.80 | 2.656 (8) | 174 |
| N3—H3 | 0.86 | 1.76 | 2.608 (9) | 166 |
| N4—H4 | 0.86 | 2.21 | 3.069 (6) | 175 |
| O1—H1 | 0.85 | 2.25 | 2.994 (18) | 146 |
| O1—H1 | 0.85 | 2.55 | 3.279 (6) | 144 |
| O2—H2 | 0.85 | 2.41 | 3.224 (13) | 160 |
| O2—H2 | 0.85 | 2.50 | 3.339 (10) | 172 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.23 | 3.081 (6) | 170 |
| N2—H2 | 0.86 | 1.80 | 2.656 (8) | 174 |
| N3—H3 | 0.86 | 1.76 | 2.608 (9) | 166 |
| N4—H4 | 0.86 | 2.21 | 3.069 (6) | 175 |
| O1—H1 | 0.85 | 2.25 | 2.994 (18) | 146 |
| O1—H1 | 0.85 | 2.55 | 3.279 (6) | 144 |
| O2—H2 | 0.85 | 2.41 | 3.224 (13) | 160 |
| O2—H2 | 0.85 | 2.50 | 3.339 (10) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .