Literature DB >> 22719284

Bis(2-trifluoro-methyl-1H-benzimidazol-3-ium) tetra-chloridomercurate dihydrate.

Ming-Liang Liu1.   

Abstract

In the title compound, (C(8)H(6)F(3)N(2))(2)[HgCl(4)]·2H(2)O, the Hg(II) cation is coordinated by four Cl(-) anions in a distorted tetra-hedral geometry. In the crystal, the 2-trifluoro-methyl-1H-benzimidazolium cations link to the [HgCl(4)](2-) complex anions and lattice water mol-ecules via N-H⋯Cl and N-H⋯O hydrogen bonds, and the lattice water mol-ecules further link to the Hg complex anion and the organic cations via O-H⋯Cl and O-H⋯F hydrogen bonding. One of the trifluoro-methyl groups is disordered over two orientations in a 0.59 (4):0.41 (4) ratio.

Entities:  

Year:  2012        PMID: 22719284      PMCID: PMC3379063          DOI: 10.1107/S1600536812018855

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to ferroelectric complexes, see: Fu et al. (2011 ▶); Ye et al. (2009 ▶). Zhang et al. (2009 ▶, 2010 ▶, 2012 ▶). For related structures, see: Liu (2011a ▶,b ▶, 2012a ▶,b ▶,c ▶).

Experimental

Crystal data

(C8H6F3N2)2[HgCl42H2O M = 752.72 Triclinic, a = 9.2485 (18) Å b = 10.029 (2) Å c = 14.754 (3) Å α = 79.40 (3)° β = 75.79 (3)° γ = 67.74 (3)° V = 1221.4 (4) Å3 Z = 2 Mo Kα radiation μ = 6.81 mm−1 T = 293 K 0.36 × 0.32 × 0.28 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.095, T max = 0.152 12786 measured reflections 5564 independent reflections 4040 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.119 S = 1.08 5564 reflections 326 parameters 9 restraints H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −1.28 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812018855/xu5519sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018855/xu5519Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C8H6F3N2)2[HgCl4]·2H2OZ = 2
Mr = 752.72F(000) = 716
Triclinic, P1Dx = 2.047 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.2485 (18) ÅCell parameters from 4366 reflections
b = 10.029 (2) Åθ = 3.0–26.0°
c = 14.754 (3) ŵ = 6.81 mm1
α = 79.40 (3)°T = 293 K
β = 75.79 (3)°Block, colourless
γ = 67.74 (3)°0.36 × 0.32 × 0.28 mm
V = 1221.4 (4) Å3
Rigaku SCXmini diffractometer5564 independent reflections
Radiation source: fine-focus sealed tube4040 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.061
CCD_Profile_fitting scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)h = −12→12
Tmin = 0.095, Tmax = 0.152k = −13→12
12786 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0373P)2 + 1.355P] where P = (Fo2 + 2Fc2)/3
5564 reflections(Δ/σ)max = 0.022
326 parametersΔρmax = 0.57 e Å3
9 restraintsΔρmin = −1.28 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
F10.7017 (13)0.721 (2)0.7840 (6)0.093 (6)0.59 (4)
F20.499 (3)0.677 (2)0.8538 (16)0.123 (10)0.59 (4)
F30.535 (3)0.8571 (9)0.8821 (10)0.112 (9)0.59 (4)
F1'0.656 (4)0.652 (3)0.7911 (14)0.137 (16)0.41 (4)
F3'0.639 (4)0.841 (2)0.843 (3)0.16 (2)0.41 (4)
F2'0.4537 (9)0.751 (3)0.8841 (12)0.102 (11)0.41 (4)
N10.7197 (6)0.4910 (6)0.9609 (4)0.0463 (14)
H1A0.69640.43710.93190.056*
N20.7409 (6)0.6807 (6)0.9988 (4)0.0446 (13)
H2A0.73280.76920.99780.053*
C10.6080 (8)0.7210 (7)0.8664 (5)0.064 (2)
C20.6894 (8)0.6313 (8)0.9408 (5)0.0446 (16)
C30.7956 (7)0.4460 (7)1.0370 (5)0.0392 (15)
C40.8554 (9)0.3110 (8)1.0833 (5)0.0522 (18)
H40.84790.22941.06620.063*
C50.9278 (9)0.3035 (8)1.1571 (5)0.0532 (18)
H50.97010.21501.19130.064*
C60.9371 (8)0.4285 (9)1.1801 (5)0.0535 (18)
H60.98600.42001.23000.064*
C70.8793 (8)0.5611 (8)1.1340 (5)0.0456 (16)
H70.88710.64251.15110.055*
C80.8083 (7)0.5692 (7)1.0604 (5)0.0376 (14)
F40.2353 (11)0.1121 (7)0.5538 (6)0.146 (3)
F50.3648 (10)0.1573 (10)0.4248 (7)0.167 (4)
F60.1251 (8)0.2625 (7)0.4538 (6)0.124 (2)
N30.3498 (7)0.3080 (7)0.5958 (4)0.0579 (16)
H3A0.38780.22710.62860.070*
N40.2323 (7)0.4628 (7)0.4921 (4)0.0526 (15)
H4A0.18220.49930.44620.063*
C90.2500 (13)0.2136 (11)0.4902 (7)0.076 (3)
C100.2768 (8)0.3277 (8)0.5263 (5)0.0503 (17)
C110.3561 (8)0.4384 (9)0.6076 (5)0.0516 (18)
C120.4205 (10)0.4786 (14)0.6680 (6)0.079 (3)
H120.47530.41190.71170.095*
C130.3997 (13)0.6218 (17)0.6601 (8)0.097 (4)
H130.43960.65340.70080.116*
C140.3236 (14)0.7196 (14)0.5960 (9)0.098 (4)
H140.31530.81550.59350.117*
C150.2581 (11)0.6842 (10)0.5344 (7)0.072 (2)
H150.20370.75250.49120.086*
C160.2792 (9)0.5380 (9)0.5415 (5)0.0524 (18)
Hg20.11556 (4)0.82505 (3)0.24321 (2)0.05631 (13)
Cl10.0685 (3)0.6016 (2)0.32320 (13)0.0606 (5)
Cl20.3673 (3)0.7252 (2)0.11954 (14)0.0653 (5)
Cl3−0.1015 (4)0.9354 (3)0.1548 (2)0.1100 (11)
Cl40.1746 (4)0.9720 (3)0.32658 (19)0.1004 (9)
O10.2620 (9)0.0518 (6)1.0084 (5)0.099 (2)
H1C0.30670.00600.96010.148*
H1B0.2751−0.00721.05760.148*
O20.4458 (11)0.0872 (10)0.7187 (7)0.166 (4)
H2B0.50020.00860.69390.249*
H2D0.36300.07830.75580.249*
U11U22U33U12U13U23
F10.066 (7)0.132 (15)0.054 (7)−0.020 (8)−0.006 (5)0.016 (7)
F20.085 (14)0.187 (19)0.124 (17)−0.076 (13)−0.071 (14)0.047 (14)
F30.130 (16)0.066 (9)0.099 (9)0.029 (8)−0.054 (10)0.000 (7)
F1'0.11 (3)0.20 (3)0.055 (12)0.015 (19)−0.030 (13)−0.034 (13)
F3'0.15 (3)0.16 (3)0.21 (4)−0.10 (2)−0.13 (3)0.13 (3)
F2'0.041 (8)0.17 (3)0.056 (9)−0.001 (11)−0.007 (7)0.001 (12)
N10.040 (3)0.054 (4)0.053 (3)−0.023 (3)−0.011 (3)−0.007 (3)
N20.037 (3)0.032 (3)0.061 (4)−0.011 (2)−0.009 (3)0.001 (3)
C10.060 (6)0.069 (6)0.057 (5)−0.020 (5)−0.013 (4)0.007 (5)
C20.031 (4)0.050 (4)0.050 (4)−0.016 (3)−0.002 (3)−0.002 (3)
C30.031 (3)0.037 (4)0.047 (4)−0.011 (3)−0.001 (3)−0.009 (3)
C40.046 (4)0.048 (4)0.067 (5)−0.024 (4)−0.005 (4)−0.007 (4)
C50.053 (5)0.047 (4)0.054 (4)−0.017 (4)−0.008 (4)0.004 (4)
C60.037 (4)0.069 (5)0.054 (4)−0.022 (4)−0.002 (3)−0.005 (4)
C70.039 (4)0.051 (4)0.050 (4)−0.019 (3)−0.002 (3)−0.016 (3)
C80.028 (3)0.039 (3)0.045 (4)−0.014 (3)0.002 (3)−0.006 (3)
F40.238 (10)0.076 (4)0.153 (6)−0.092 (5)−0.050 (6)0.011 (4)
F50.130 (6)0.189 (8)0.213 (9)−0.090 (6)0.056 (6)−0.144 (7)
F60.119 (5)0.108 (5)0.188 (7)−0.048 (4)−0.078 (5)−0.035 (5)
N30.041 (4)0.063 (4)0.059 (4)−0.012 (3)−0.014 (3)0.013 (3)
N40.057 (4)0.065 (4)0.044 (3)−0.031 (3)−0.017 (3)0.005 (3)
C90.078 (7)0.074 (6)0.085 (7)−0.035 (5)−0.005 (6)−0.022 (6)
C100.037 (4)0.054 (4)0.055 (4)−0.014 (3)−0.010 (3)0.003 (4)
C110.038 (4)0.080 (5)0.040 (4)−0.027 (4)−0.006 (3)0.002 (4)
C120.047 (5)0.137 (10)0.056 (5)−0.038 (6)0.000 (4)−0.015 (6)
C130.080 (8)0.163 (13)0.074 (7)−0.069 (8)0.011 (6)−0.055 (8)
C140.100 (9)0.119 (9)0.101 (8)−0.078 (8)0.019 (7)−0.040 (8)
C150.065 (6)0.079 (6)0.075 (6)−0.037 (5)−0.003 (5)−0.008 (5)
C160.044 (4)0.067 (5)0.054 (4)−0.032 (4)−0.004 (4)−0.007 (4)
Hg20.0667 (2)0.0587 (2)0.05325 (19)−0.03158 (16)−0.01580 (15)−0.00235 (14)
Cl10.0810 (14)0.0633 (12)0.0535 (11)−0.0420 (11)−0.0290 (10)0.0135 (9)
Cl20.0645 (13)0.0756 (13)0.0635 (12)−0.0374 (11)0.0002 (10)−0.0144 (11)
Cl30.133 (3)0.0746 (16)0.155 (3)−0.0507 (17)−0.103 (2)0.0420 (17)
Cl40.158 (3)0.0916 (18)0.0906 (17)−0.0746 (19)−0.0426 (18)−0.0120 (15)
O10.142 (7)0.050 (3)0.112 (5)−0.033 (4)−0.048 (5)0.006 (4)
O20.122 (7)0.135 (7)0.152 (8)0.018 (6)−0.038 (6)0.076 (7)
F1—C11.308 (2)N3—C101.308 (9)
F2—C11.309 (2)N3—C111.375 (10)
F3—C11.309 (2)N3—H3A0.8599
F1'—C11.309 (2)N4—C101.300 (9)
F3'—C11.309 (2)N4—C161.376 (9)
F2'—C11.309 (2)N4—H4A0.8601
N1—C21.317 (9)C9—C101.469 (11)
N1—C31.386 (8)C11—C161.377 (10)
N1—H1A0.8600C11—C121.374 (12)
N2—C21.318 (8)C12—C131.361 (15)
N2—C81.357 (8)C12—H120.9300
N2—H2A0.8600C13—C141.347 (16)
C1—C21.453 (10)C13—H130.9300
C3—C41.371 (9)C14—C151.368 (14)
C3—C81.395 (8)C14—H140.9300
C4—C51.390 (10)C15—C161.391 (11)
C4—H40.9300C15—H150.9300
C5—C61.395 (10)Hg2—Cl42.364 (2)
C5—H50.9300Hg2—Cl32.455 (3)
C6—C71.350 (10)Hg2—Cl12.4734 (19)
C6—H60.9300Hg2—Cl22.564 (2)
C7—C81.377 (9)O1—H1C0.8500
C7—H70.9300O1—H1B0.8500
F4—C91.274 (11)O2—H2B0.8500
F5—C91.274 (11)O2—H2D0.8500
F6—C91.281 (11)
C2—N1—C3107.7 (6)N2—C8—C3106.5 (6)
C2—N1—H1A126.1C7—C8—C3120.8 (6)
C3—N1—H1A126.2C10—N3—C11108.6 (6)
C2—N2—C8108.9 (6)C10—N3—H3A125.8
C2—N2—H2A125.6C11—N3—H3A125.7
C8—N2—H2A125.5C10—N4—C16108.4 (6)
F1—C1—F2'127.4 (10)C10—N4—H4A125.9
F1—C1—F3'68.6 (15)C16—N4—H4A125.7
F2'—C1—F3'109.5 (15)F4—C9—F5107.8 (10)
F1—C1—F3106.1 (10)F4—C9—F6107.4 (9)
F2'—C1—F370.4 (12)F5—C9—F6105.6 (10)
F1—C1—F2104.5 (11)F4—C9—C10112.6 (9)
F3'—C1—F2135.0 (11)F5—C9—C10110.9 (8)
F3—C1—F2105.9 (12)F6—C9—C10112.3 (8)
F2'—C1—F1'103.1 (16)N4—C10—N3110.6 (7)
F3'—C1—F1'107.4 (18)N4—C10—C9124.1 (8)
F3—C1—F1'134.0 (13)N3—C10—C9125.2 (8)
F2—C1—F1'68.8 (14)N3—C11—C16105.9 (6)
F1—C1—C2113.7 (8)N3—C11—C12132.9 (9)
F2'—C1—C2115.1 (9)C16—C11—C12121.2 (9)
F3'—C1—C2111.0 (9)C13—C12—C11116.1 (10)
F3—C1—C2113.6 (7)C13—C12—H12121.9
F2—C1—C2112.1 (7)C11—C12—H12121.9
F1'—C1—C2110.1 (9)C14—C13—C12122.8 (10)
N1—C2—N2110.7 (6)C14—C13—H13118.6
N1—C2—C1125.2 (6)C12—C13—H13118.6
N2—C2—C1124.1 (6)C13—C14—C15123.0 (11)
C4—C3—N1130.9 (6)C13—C14—H14118.5
C4—C3—C8122.9 (6)C15—C14—H14118.5
N1—C3—C8106.2 (6)C14—C15—C16114.7 (10)
C3—C4—C5116.0 (6)C14—C15—H15122.6
C3—C4—H4122.0C16—C15—H15122.6
C5—C4—H4122.0C11—C16—N4106.5 (7)
C4—C5—C6120.1 (7)C11—C16—C15122.1 (8)
C4—C5—H5119.9N4—C16—C15131.4 (8)
C6—C5—H5119.9Cl4—Hg2—Cl3119.35 (10)
C7—C6—C5123.8 (7)Cl4—Hg2—Cl1120.36 (8)
C7—C6—H6118.1Cl3—Hg2—Cl1102.26 (8)
C5—C6—H6118.1Cl4—Hg2—Cl2105.49 (10)
C6—C7—C8116.4 (6)Cl3—Hg2—Cl2105.13 (11)
C6—C7—H7121.8Cl1—Hg2—Cl2102.10 (8)
C8—C7—H7121.8H1C—O1—H1B109.5
N2—C8—C7132.7 (6)H2B—O2—H2D109.5
C3—N1—C2—N20.2 (8)N1—C3—C8—N20.0 (7)
C3—N1—C2—C1−178.8 (6)C4—C3—C8—C7−1.7 (10)
C8—N2—C2—N1−0.2 (8)N1—C3—C8—C7−179.9 (6)
C8—N2—C2—C1178.9 (6)C16—N4—C10—N30.3 (8)
F1—C1—C2—N1−84.6 (15)C16—N4—C10—C9−178.9 (8)
F2'—C1—C2—N175.3 (19)C11—N3—C10—N4−0.9 (9)
F3'—C1—C2—N1−160 (2)C11—N3—C10—C9178.3 (8)
F3—C1—C2—N1153.8 (14)F4—C9—C10—N4−150.4 (9)
F2—C1—C2—N133.7 (19)F5—C9—C10—N488.8 (12)
F1'—C1—C2—N1−41 (3)F6—C9—C10—N4−29.0 (13)
F1—C1—C2—N296.5 (14)F4—C9—C10—N330.4 (13)
F2'—C1—C2—N2−103.6 (17)F5—C9—C10—N3−90.4 (12)
F3'—C1—C2—N222 (2)F6—C9—C10—N3151.8 (9)
F3—C1—C2—N2−25.1 (14)C10—N3—C11—C161.1 (8)
F2—C1—C2—N2−145.2 (16)C10—N3—C11—C12−178.6 (8)
F1'—C1—C2—N2140 (2)N3—C11—C12—C13−178.5 (8)
C2—N1—C3—C4−178.1 (7)C16—C11—C12—C131.8 (12)
C2—N1—C3—C8−0.1 (7)C11—C12—C13—C14−1.4 (15)
N1—C3—C4—C5178.9 (7)C12—C13—C14—C151.3 (17)
C8—C3—C4—C51.3 (10)C13—C14—C15—C16−1.4 (15)
C3—C4—C5—C6−0.3 (10)N3—C11—C16—N4−0.9 (8)
C4—C5—C6—C7−0.2 (11)C12—C11—C16—N4178.8 (7)
C5—C6—C7—C8−0.2 (10)N3—C11—C16—C15178.1 (7)
C2—N2—C8—C7180.0 (7)C12—C11—C16—C15−2.2 (12)
C2—N2—C8—C30.1 (7)C10—N4—C16—C110.4 (8)
C6—C7—C8—N2−178.8 (7)C10—N4—C16—C15−178.5 (8)
C6—C7—C8—C31.1 (9)C14—C15—C16—C111.9 (12)
C4—C3—C8—N2178.2 (6)C14—C15—C16—N4−179.5 (8)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl2i0.862.233.081 (6)170
N2—H2A···O1ii0.861.802.656 (8)174
N3—H3A···O20.861.762.608 (9)166
N4—H4A···Cl10.862.213.069 (6)175
O1—H1C···F3iii0.852.252.994 (18)146
O1—H1B···Cl2iv0.852.553.279 (6)144
O2—H2B···F5v0.852.413.224 (13)160
O2—H2D···Cl3vi0.852.503.339 (10)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Cl2i0.862.233.081 (6)170
N2—H2A⋯O1ii0.861.802.656 (8)174
N3—H3A⋯O20.861.762.608 (9)166
N4—H4A⋯Cl10.862.213.069 (6)175
O1—H1C⋯F3iii0.852.252.994 (18)146
O1—H1B⋯Cl2iv0.852.553.279 (6)144
O2—H2B⋯F5v0.852.413.224 (13)160
O2—H2D⋯Cl3vi0.852.503.339 (10)172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  11 in total

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Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

2.  Ferroelectric metal-organic frameworks.

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Journal:  Chem Rev       Date:  2011-09-23       Impact factor: 60.622

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Hydrogen-bonded ferroelectrics based on metal-organic coordination.

Authors:  Heng-Yun Ye; Da-Wei Fu; Yi Zhang; Wen Zhang; Ren-Gen Xiong; Songping D Huang
Journal:  J Am Chem Soc       Date:  2009-01-14       Impact factor: 15.419

5.  New ferroelectrics based on divalent metal ion alum.

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6.  2-Trifluoro-methyl-1H-benzimidazol-3-ium perchlorate.

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-05

7.  2-Trifluoro-methyl-1H-benzimidazol-3-ium hydrogen sulfate.

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30

8.  Bis(2-trifluoro-methyl-1H-benzimidazol-3-ium) naphthalene-1,5-disulfonate.

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11

9.  2-Trifluoro-methyl-1H-benzimidazol-3-ium nitrate.

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-10

10.  2-Trifluoro-methyl-1H-benzimidazol-3-ium tetra-fluoro-borate-2-trifluoro-methyl-1H-benzimidazole-water (1/1/1).

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-17
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