Literature DB >> 22091038

2-Ethyl-N-[(5-nitro-thio-phen-2-yl)methyl-idene]aniline.

Umit Ceylan, Hasan Tanak, Sümeyye Gümüş, Erbil Ağar.   

Abstract

In the title compound, C(13)H(12)N(2)O(2)S, the dihedral angle between the n class="Chemical">benzene and thio-phene rings is 36.72 (8)°. An inter-molecular C-H⋯π inter-action contributes to the stability of the crystal structure.

Entities:  

Year:  2011        PMID: 22091038      PMCID: PMC3213459          DOI: 10.1107/S1600536811024615

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff bases, see: Barton & Ollis (1979 ▶); Layer (1963 ▶); Ingold (1969 ▶); for their industrial properties, see: Taggi et al. (2002 ▶) and for their reaction properties, see: Aydoğan et al. (2001 ▶). For related structures, see: Ağar et al. (2010 ▶); Tanak et al. (2010 ▶); Demirtaş et al. (2009 ▶).

Experimental

Crystal data

C13H12N2O2S M = 260.31 Monoclinic, a = 11.3578 (4) Å b = 7.4923 (2) Å c = 14.9676 (6) Å β = 99.589 (3)° V = 1255.89 (7) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 296 K 0.54 × 0.41 × 0.23 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.866, T max = 0.954 12190 measured reflections 2468 independent reflections 2195 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.087 S = 1.05 2468 reflections 176 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.16 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811024615/vm2106sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024615/vm2106Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811024615/vm2106Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12N2O2SF(000) = 544
Mr = 260.31Dx = 1.377 Mg m3
Monoclinic, P21/cMelting point = 385–387 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.3578 (4) ÅCell parameters from 18861 reflections
b = 7.4923 (2) Åθ = 1.8–28.0°
c = 14.9676 (6) ŵ = 0.25 mm1
β = 99.589 (3)°T = 296 K
V = 1255.89 (7) Å3Prism, yellow
Z = 40.54 × 0.41 × 0.23 mm
Stoe IPDS 2 diffractometer2468 independent reflections
Radiation source: fine-focus sealed tube2195 reflections with I > 2σ(I)
graphiteRint = 0.040
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 1.8°
rotation method scansh = −13→13
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −9→9
Tmin = 0.866, Tmax = 0.954l = −18→18
12190 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.087w = 1/[σ2(Fo2) + (0.0438P)2 + 0.2213P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2468 reflectionsΔρmax = 0.14 e Å3
176 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0197 (19)
Experimental. 256 frames, detector distance = 100 mm
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C130.75353 (12)0.1347 (2)0.42892 (10)0.0489 (3)
H90.5748 (13)0.056 (2)0.1442 (11)0.051 (4)*
H80.2532 (19)−0.043 (3)0.2366 (14)0.085 (6)*
H70.243 (2)0.157 (3)0.2581 (16)0.096 (7)*
S10.60815 (3)0.17034 (5)0.38059 (2)0.05021 (14)
N10.44485 (10)0.15763 (16)0.20080 (8)0.0464 (3)
C10.36158 (12)0.16196 (19)0.11890 (9)0.0457 (3)
C50.16094 (14)0.1298 (2)0.04281 (11)0.0600 (4)
H50.08150.10060.04330.072*
C110.75953 (12)0.0594 (2)0.28326 (10)0.0534 (4)
H110.79280.02150.23380.064*
C20.39465 (14)0.2164 (2)0.03818 (10)0.0567 (4)
H20.47380.24640.03680.068*
C60.24197 (12)0.11916 (19)0.12317 (10)0.0482 (3)
N20.78998 (12)0.1655 (2)0.52375 (9)0.0621 (4)
O20.89564 (11)0.1458 (2)0.55569 (9)0.0861 (4)
C100.64167 (12)0.10510 (19)0.27810 (9)0.0453 (3)
C120.82434 (12)0.0758 (2)0.37105 (11)0.0550 (4)
H120.90510.04960.38730.066*
C40.19440 (16)0.1820 (3)−0.03736 (11)0.0686 (5)
H40.13780.1873−0.08990.082*
C70.20824 (14)0.0661 (3)0.21248 (12)0.0601 (4)
O10.71418 (13)0.2089 (2)0.56818 (9)0.0905 (5)
C30.31134 (16)0.2266 (3)−0.04023 (11)0.0659 (4)
H30.33390.2632−0.09430.079*
C80.07793 (16)0.0419 (4)0.21480 (16)0.0947 (7)
H8A0.06720.00830.27480.142*
H8B0.0465−0.05000.17280.142*
H8C0.03660.15180.19820.142*
C90.55012 (12)0.10376 (19)0.19795 (10)0.0472 (3)
U11U22U33U12U13U23
C130.0404 (7)0.0530 (8)0.0504 (8)0.0000 (6)−0.0013 (6)0.0022 (6)
S10.0381 (2)0.0632 (3)0.0480 (2)0.00633 (15)0.00307 (13)0.00008 (16)
N10.0417 (6)0.0505 (7)0.0444 (6)−0.0007 (5)−0.0007 (5)0.0011 (5)
C10.0440 (7)0.0468 (7)0.0433 (7)0.0034 (6)−0.0012 (5)−0.0047 (6)
C50.0461 (8)0.0682 (10)0.0608 (9)0.0012 (7)−0.0058 (7)−0.0117 (8)
C110.0429 (7)0.0630 (9)0.0541 (8)0.0059 (7)0.0078 (6)0.0004 (7)
C20.0510 (8)0.0697 (10)0.0476 (8)0.0040 (7)0.0034 (6)0.0004 (7)
C60.0449 (7)0.0463 (7)0.0507 (8)0.0035 (6)0.0003 (6)−0.0065 (6)
N20.0560 (8)0.0724 (9)0.0530 (7)0.0014 (6)−0.0050 (6)−0.0027 (6)
O20.0582 (7)0.1187 (11)0.0706 (8)−0.0005 (7)−0.0210 (6)−0.0045 (8)
C100.0404 (7)0.0454 (7)0.0488 (7)0.0006 (5)0.0036 (5)0.0028 (6)
C120.0369 (7)0.0635 (9)0.0625 (9)0.0047 (6)0.0023 (6)0.0036 (7)
C40.0644 (10)0.0853 (12)0.0482 (8)0.0101 (8)−0.0137 (7)−0.0109 (8)
C70.0494 (8)0.0670 (10)0.0630 (9)0.0006 (7)0.0066 (7)0.0042 (8)
O10.0784 (9)0.1339 (13)0.0568 (7)0.0181 (8)0.0037 (6)−0.0176 (8)
C30.0673 (10)0.0848 (12)0.0429 (8)0.0100 (9)0.0014 (7)0.0000 (8)
C80.0552 (10)0.140 (2)0.0904 (14)−0.0003 (12)0.0176 (10)0.0205 (14)
C90.0457 (7)0.0493 (8)0.0451 (7)0.0005 (6)0.0034 (6)0.0006 (6)
C13—C121.351 (2)C6—C71.504 (2)
C13—N21.430 (2)N2—O11.2164 (19)
C13—S11.7097 (14)N2—O21.2245 (17)
S1—C101.7122 (15)C10—C91.4508 (19)
N1—C91.2694 (18)C12—H120.9300
N1—C11.4185 (17)C4—C31.377 (3)
C1—C21.385 (2)C4—H40.9300
C1—C61.4077 (19)C7—C81.497 (2)
C5—C41.375 (3)C7—H81.00 (2)
C5—C61.390 (2)C7—H71.00 (2)
C5—H50.9300C3—H30.9300
C11—C101.3714 (19)C8—H8A0.9600
C11—C121.400 (2)C8—H8B0.9600
C11—H110.9300C8—H8C0.9600
C2—C31.382 (2)C9—H90.963 (16)
C2—H20.9300
C12—C13—N2125.78 (13)C9—C10—S1120.47 (10)
C12—C13—S1114.58 (11)C13—C12—C11110.75 (13)
N2—C13—S1119.63 (11)C13—C12—H12124.6
C13—S1—C1089.50 (7)C11—C12—H12124.6
C9—N1—C1118.32 (12)C5—C4—C3120.31 (14)
C2—C1—C6120.72 (13)C5—C4—H4119.8
C2—C1—N1121.47 (13)C3—C4—H4119.8
C6—C1—N1117.71 (12)C8—C7—C6116.85 (15)
C4—C5—C6122.17 (15)C8—C7—H8109.9 (12)
C4—C5—H5118.9C6—C7—H8110.3 (12)
C6—C5—H5118.9C8—C7—H7110.3 (13)
C10—C11—C12112.74 (14)C6—C7—H7107.2 (13)
C10—C11—H11123.6H8—C7—H7101.0 (17)
C12—C11—H11123.6C4—C3—C2119.19 (16)
C3—C2—C1120.70 (15)C4—C3—H3120.4
C3—C2—H2119.7C2—C3—H3120.4
C1—C2—H2119.7C7—C8—H8A109.5
C5—C6—C1116.91 (14)C7—C8—H8B109.5
C5—C6—C7123.67 (14)H8A—C8—H8B109.5
C1—C6—C7119.42 (13)C7—C8—H8C109.5
O1—N2—O2123.75 (15)H8A—C8—H8C109.5
O1—N2—C13118.15 (13)H8B—C8—H8C109.5
O2—N2—C13118.10 (14)N1—C9—C10121.28 (14)
C11—C10—C9127.10 (14)N1—C9—H9123.5 (9)
C11—C10—S1112.43 (11)C10—C9—H9115.2 (9)
C12—C13—S1—C10−0.24 (12)C12—C11—C10—C9179.87 (14)
N2—C13—S1—C10−179.44 (13)C12—C11—C10—S10.35 (17)
C9—N1—C1—C2−39.8 (2)C13—S1—C10—C11−0.07 (12)
C9—N1—C1—C6143.95 (14)C13—S1—C10—C9−179.63 (12)
C6—C1—C2—C3−1.2 (2)N2—C13—C12—C11179.62 (14)
N1—C1—C2—C3−177.40 (14)S1—C13—C12—C110.47 (18)
C4—C5—C6—C1−0.9 (2)C10—C11—C12—C13−0.5 (2)
C4—C5—C6—C7178.76 (16)C6—C5—C4—C3−0.2 (3)
C2—C1—C6—C51.6 (2)C5—C6—C7—C8−6.3 (3)
N1—C1—C6—C5177.94 (13)C1—C6—C7—C8173.42 (17)
C2—C1—C6—C7−178.07 (15)C5—C4—C3—C20.7 (3)
N1—C1—C6—C7−1.8 (2)C1—C2—C3—C40.0 (3)
C12—C13—N2—O1−175.78 (17)C1—N1—C9—C10176.56 (12)
S1—C13—N2—O13.3 (2)C11—C10—C9—N1−176.47 (14)
C12—C13—N2—O23.8 (2)S1—C10—C9—N13.0 (2)
S1—C13—N2—O2−177.09 (13)
Cg1 is the centroid of the C10–C13/S1 ring.
D—H···AD—HH···AD···AD—H···A
C7—H8···Cg1i1.00 (2)2.94 (2)3.678 (2)131.0 (15)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C10–C13/S1 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H8⋯Cg1i1.00 (2)2.94 (2)3.678 (2)131.0 (15)

Symmetry code: (i) .

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4.  (E)-3-[(2-Methyl-4-nitro-phen-yl)imino-meth-yl]-1-benzothio-phene.

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5.  (Z)-3-Meth-oxy-N-[(5-nitro-thio-phen-2-yl)methyl-idene]aniline.

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6.  4-Meth-oxy-N-[(E)-(5-nitro-thio-phen-2-yl)methyl-idene]aniline.

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