Literature DB >> 23125793

4-Meth-oxy-N-[(E)-(5-nitro-thio-phen-2-yl)methyl-idene]aniline.

Tufan Akbal1, Erbil Ağar, Sümeyye Gümüş, Ahmet Erdönmez.   

Abstract

The title mol-ecule, C(12)H(10)N(2)O(3)S, is nonplanar with an inter-planar angle of 33.44 (7)° between the benzene and thio-phene rings. In the crystal there exist only weak inter-molecular C-H⋯O inter-actions, π-π inter-actions between the benzene rings [centroid-centroid distance = 3.7465 (14) Å] and X-Y⋯π inter-actions to the thio-phene and benzene rings [N⋯centroid distances = 3.718 (3) and 3.355 (3) Å, respectively]. Inter-molecular C-H⋯O inter-actions link the mol-ecules into chains parallel to the a axis.

Entities:  

Year:  2012        PMID: 23125793      PMCID: PMC3470380          DOI: 10.1107/S1600536812034344

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff bases, see Layer (1963 ▶); Ingold (1969 ▶); Barton & Ollis (1979 ▶). For the application of Schiff bases in industry, see Taggi et al. (2002 ▶). For related structures, see Ceylan et al. (2011 ▶); Özdemir & Işık (2012 ▶).

Experimental

Crystal data

C12H10N2O3S M = 262.28 Monoclinic, a = 12.5641 (7) Å b = 13.1441 (5) Å c = 7.7896 (4) Å β = 106.012 (4)° V = 1236.50 (10) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 296 K 0.69 × 0.51 × 0.28 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.873, T max = 0.938 20097 measured reflections 2841 independent reflections 2076 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.125 S = 1.15 2841 reflections 164 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.22 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: WinGX (Farrugia, 1997 ▶) and SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812034344/fb2260sup1.cif Supplementary material file. DOI: 10.1107/S1600536812034344/fb2260Isup2.mol Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812034344/fb2260Isup3.hkl Supplementary material file. DOI: 10.1107/S1600536812034344/fb2260Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H10N2O3SF(000) = 544
Mr = 262.28Dx = 1.409 Mg m3
Monoclinic, P21/cMelting point = 414–417 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 12.5641 (7) ÅCell parameters from 20097 reflections
b = 13.1441 (5) Åθ = 2.3–27.6°
c = 7.7896 (4) ŵ = 0.26 mm1
β = 106.012 (4)°T = 296 K
V = 1236.50 (10) Å3Prism, yellow
Z = 40.69 × 0.51 × 0.28 mm
Stoe IPDS 2 diffractometer2841 independent reflections
Radiation source: fine-focus sealed tube2076 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.053
w–scan rotationθmax = 27.6°, θmin = 2.3°
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)h = −16→16
Tmin = 0.873, Tmax = 0.938k = −17→17
20097 measured reflectionsl = −10→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.125w = 1/[σ2(Fo2) + (0.0447P)2 + 0.3031P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max < 0.001
2841 reflectionsΔρmax = 0.29 e Å3
164 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
39 constraintsExtinction coefficient: 0
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.77562 (5)0.12622 (5)0.06150 (7)0.05989 (19)
C10.51607 (18)0.11596 (17)0.3360 (3)0.0561 (5)
N20.60693 (16)0.11489 (15)0.2619 (3)0.0597 (5)
C110.70493 (19)0.11725 (18)0.3637 (3)0.0586 (5)
H110.71680.11760.48700.070*
C90.97699 (19)0.1197 (2)0.2631 (3)0.0658 (6)
H91.05400.11860.30030.079*
O30.23334 (13)0.11016 (14)0.5127 (2)0.0722 (5)
N10.95778 (19)0.12583 (16)−0.0612 (3)0.0693 (5)
C100.91555 (18)0.12453 (18)0.0913 (3)0.0576 (5)
C40.32882 (18)0.11543 (17)0.4617 (3)0.0572 (5)
O11.05738 (18)0.12534 (19)−0.0377 (3)0.0968 (7)
O20.88984 (18)0.12695 (18)−0.2095 (2)0.0922 (6)
C70.79851 (18)0.11941 (18)0.2889 (3)0.0554 (5)
C80.90855 (19)0.1166 (2)0.3776 (3)0.0657 (6)
H80.93530.11310.50130.079*
C20.5164 (2)0.1630 (2)0.4951 (3)0.0660 (6)
H20.58040.19560.56070.079*
C30.4248 (2)0.1628 (2)0.5585 (3)0.0661 (6)
H30.42730.19440.66630.079*
C50.32604 (19)0.0703 (2)0.3006 (3)0.0643 (6)
H50.26140.03900.23390.077*
C60.41788 (18)0.0713 (2)0.2382 (3)0.0616 (6)
H60.41440.04160.12850.074*
C120.2326 (3)0.1537 (3)0.6792 (4)0.0895 (9)
H12A0.16270.14020.70230.134*
H12B0.24350.22590.67540.134*
H12C0.29110.12450.77250.134*
U11U22U33U12U13U23
S10.0572 (3)0.0756 (4)0.0446 (3)−0.0047 (3)0.0102 (2)−0.0023 (3)
C10.0560 (12)0.0581 (13)0.0533 (12)−0.0017 (10)0.0132 (10)0.0017 (10)
N20.0581 (11)0.0657 (12)0.0558 (11)−0.0027 (9)0.0163 (9)0.0021 (9)
C110.0615 (13)0.0663 (14)0.0499 (12)−0.0029 (11)0.0184 (10)0.0034 (11)
C90.0530 (12)0.0927 (18)0.0504 (13)−0.0001 (12)0.0120 (10)−0.0022 (12)
O30.0560 (9)0.0878 (12)0.0758 (11)−0.0055 (8)0.0235 (8)−0.0134 (9)
N10.0777 (14)0.0796 (14)0.0574 (13)−0.0052 (12)0.0302 (11)−0.0056 (11)
C100.0595 (12)0.0671 (13)0.0487 (12)−0.0024 (11)0.0193 (10)−0.0034 (11)
C40.0505 (11)0.0578 (13)0.0617 (14)0.0034 (10)0.0129 (10)−0.0004 (11)
O10.0818 (13)0.1392 (19)0.0829 (14)−0.0052 (13)0.0452 (11)−0.0052 (13)
O20.1034 (14)0.1289 (18)0.0462 (10)−0.0080 (13)0.0236 (10)−0.0058 (11)
C70.0579 (12)0.0619 (13)0.0471 (12)−0.0052 (10)0.0158 (9)0.0001 (10)
C80.0590 (13)0.0936 (18)0.0433 (12)−0.0005 (12)0.0122 (10)−0.0002 (12)
C20.0553 (13)0.0729 (15)0.0680 (15)−0.0135 (11)0.0141 (11)−0.0142 (12)
C30.0628 (14)0.0727 (15)0.0639 (15)−0.0098 (12)0.0192 (12)−0.0175 (12)
C50.0508 (12)0.0765 (16)0.0612 (15)−0.0081 (11)0.0082 (10)−0.0097 (12)
C60.0572 (13)0.0746 (16)0.0500 (13)−0.0030 (11)0.0099 (10)−0.0063 (11)
C120.0811 (18)0.106 (2)0.094 (2)−0.0108 (16)0.0447 (16)−0.0271 (17)
S1—C101.709 (2)N1—C101.429 (3)
S1—C71.717 (2)C4—C51.380 (3)
C1—C21.384 (3)C4—C31.381 (3)
C1—C61.389 (3)C7—C81.365 (3)
C1—N21.414 (3)C8—H80.9300
N2—C111.268 (3)C2—C31.372 (3)
C11—C71.449 (3)C2—H20.9300
C11—H110.9300C3—H30.9300
C9—C101.350 (3)C5—C61.370 (3)
C9—C81.400 (3)C5—H50.9300
C9—H90.9300C6—H60.9300
O3—C41.366 (3)C12—H12A0.9600
O3—C121.420 (3)C12—H12B0.9600
N1—O11.214 (3)C12—H12C0.9600
N1—O21.232 (3)
C10—S1—C789.19 (10)C11—C7—S1119.49 (17)
C2—C1—C6117.6 (2)C7—C8—C9113.0 (2)
C2—C1—N2124.5 (2)C7—C8—H8123.5
C6—C1—N2117.8 (2)C9—C8—H8123.5
C11—N2—C1119.9 (2)C3—C2—C1121.7 (2)
N2—C11—C7120.3 (2)C3—C2—H2119.2
N2—C11—H11119.9C1—C2—H2119.2
C7—C11—H11119.9C2—C3—C4119.8 (2)
C10—C9—C8110.4 (2)C2—C3—H3120.1
C10—C9—H9124.8C4—C3—H3120.1
C8—C9—H9124.8C6—C5—C4120.4 (2)
C4—O3—C12118.2 (2)C6—C5—H5119.8
O1—N1—O2124.1 (2)C4—C5—H5119.8
O1—N1—C10118.6 (2)C5—C6—C1121.2 (2)
O2—N1—C10117.3 (2)C5—C6—H6119.4
C9—C10—N1125.7 (2)C1—C6—H6119.4
C9—C10—S1114.89 (17)O3—C12—H12A109.5
N1—C10—S1119.41 (18)O3—C12—H12B109.5
O3—C4—C5116.0 (2)H12A—C12—H12B109.5
O3—C4—C3124.7 (2)O3—C12—H12C109.5
C5—C4—C3119.3 (2)H12A—C12—H12C109.5
C8—C7—C11128.1 (2)H12B—C12—H12C109.5
C8—C7—S1112.44 (16)
C2—C1—N2—C1130.4 (4)C10—S1—C7—C80.3 (2)
C6—C1—N2—C11−153.0 (2)C10—S1—C7—C11−179.7 (2)
C1—N2—C11—C7−178.1 (2)C11—C7—C8—C9179.8 (2)
C8—C9—C10—N1−178.2 (2)S1—C7—C8—C9−0.2 (3)
C8—C9—C10—S10.3 (3)C10—C9—C8—C7−0.1 (3)
O1—N1—C10—C9−2.1 (4)C6—C1—C2—C32.4 (4)
O2—N1—C10—C9177.6 (3)N2—C1—C2—C3178.9 (2)
O1—N1—C10—S1179.5 (2)C1—C2—C3—C4−0.6 (4)
O2—N1—C10—S1−0.8 (3)O3—C4—C3—C2179.6 (2)
C7—S1—C10—C9−0.4 (2)C5—C4—C3—C2−1.0 (4)
C7—S1—C10—N1178.2 (2)O3—C4—C5—C6−179.8 (2)
C12—O3—C4—C5178.8 (2)C3—C4—C5—C60.8 (4)
C12—O3—C4—C3−1.8 (4)C4—C5—C6—C11.0 (4)
N2—C11—C7—C8−176.2 (2)C2—C1—C6—C5−2.6 (4)
N2—C11—C7—S13.8 (3)N2—C1—C6—C5−179.4 (2)
D—H···AD—HH···AD···AD—H···A
C8—H8···O2i0.932.483.292 (3)146
C9—H9···O3ii0.932.403.273 (3)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8⋯O2i 0.932.483.292 (3)146
C9—H9⋯O3ii 0.932.403.273 (3)156

Symmetry codes: (i) ; (ii) .

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