Literature DB >> 22000511

Advances in structural and functional analysis of membrane proteins by electron crystallography.

Goragot Wisedchaisri1, Steve L Reichow, Tamir Gonen.   

Abstract

Electron crystallography is a powerful technique for the study of membrane protein structure and function in the lipid environment. When well-ordered two-dimensional crystals are obtained the structure of both protein and lipid can be determined and lipid-protein interactions analyzed. Protons and ionic charges can be visualized by electron crystallography and the protein of interest can be captured for structural analysis in a variety of physiologically distinct states. This review highlights the strengths of electron crystallography and the momentum that is building up in automation and the development of high throughput tools and methods for structural and functional analysis of membrane proteins by electron crystallography.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID： 22000511      PMCID： PMC3197218          DOI： 10.1016/j.str.2011.09.001

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


  74 in total

1.  Automatic TEM image analysis of membranes for 2D crystal detection.

Authors:  Argyro Karathanou; Nicolas Coudray; Gilles Hermann; Jean-Luc Buessler; Jean-Philippe Urban
Journal:  Adv Exp Med Biol       Date:  2010       Impact factor: 2.622

2.  Cell biology: a greasy grip.

Authors:  Anthony G Lee
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

3.  Quasi-symmetry in the cryo-EM structure of EmrE provides the key to modeling its transmembrane domain.

Authors:  Sarel J Fleishman; Susan E Harrington; Angela Enosh; Dan Halperin; Christopher G Tate; Nir Ben-Tal
Journal:  J Mol Biol       Date:  2006-08-30       Impact factor: 5.469

4.  Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels.

Authors:  Atsunori Oshima; Kazutoshi Tani; Masoud M Toloue; Yoko Hiroaki; Amy Smock; Sayaka Inukai; Angela Cone; Bruce J Nicholson; Gina E Sosinsky; Yoshinori Fujiyoshi
Journal:  J Mol Biol       Date:  2010-11-20       Impact factor: 5.469

5.  2dx_merge: data management and merging for 2D crystal images.

Authors:  Bryant Gipson; Xiangyan Zeng; Henning Stahlberg
Journal:  J Struct Biol       Date:  2007-09-25       Impact factor: 2.867

6.  Simulation of charge effects on density maps obtained by high-resolution electron crystallography.

Authors:  Teruhisa Hirai; Kaoru Mitsuoka; Akinori Kidera; Yoshinori Fujiyoshi
Journal:  J Electron Microsc (Tokyo)       Date:  2007-10-17

7.  Conformations of NhaA, the Na/H exchanger from Escherichia coli, in the pH-activated and ion-translocating states.

Authors:  Matthias Appel; Dilem Hizlan; Kutti R Vinothkumar; Christine Ziegler; Werner Kühlbrandt
Journal:  J Mol Biol       Date:  2008-12-25       Impact factor: 5.469

8.  Structure of bacteriorhodopsin at 1.55 A resolution.

Authors:  H Luecke; B Schobert; H T Richter; J P Cartailler; J K Lanyi
Journal:  J Mol Biol       Date:  1999-08-27       Impact factor: 5.469

Review 9.  High-resolution electron crystallography of protein molecules.

Authors:  R M Glaeser; K H Downing
Journal:  Ultramicroscopy       Date:  1993-12       Impact factor: 2.689

10.  Trehalose embedding technique for high-resolution electron crystallography: application to structural study on bacteriorhodopsin.

Authors:  T Hirai; K Murata; K Mitsuoka; Y Kimura; Y Fujiyoshi
Journal:  J Electron Microsc (Tokyo)       Date:  1999
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  13 in total

Review 1.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

Review 2.  The cryo-EM method microcrystal electron diffraction (MicroED).

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Nat Methods       Date:  2019-04-29       Impact factor: 28.547

3.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
Journal:  Chem Rev       Date:  2019-02-13       Impact factor: 60.622

Review 4.  Structure-function studies with G protein-coupled receptors as a paradigm for improving drug discovery and development of therapeutics.

Authors:  Patrick M McNeely; Andrea N Naranjo; Anne S Robinson
Journal:  Biotechnol J       Date:  2012-12       Impact factor: 4.677

5.  Engineered Cross-Linking to Study the Pore Architecture of the CRAC Channel.

Authors:  Guolin Ma; Lian He; Ji Jing; Peng Tan; Yun Huang; Yubin Zhou
Journal:  Methods Mol Biol       Date:  2018

Review 6.  Protein structure determination by MicroED.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2014-04-05       Impact factor: 6.809

7.  Overview of electron crystallography of membrane proteins: crystallization and screening strategies using negative stain electron microscopy.

Authors:  Brent L Nannenga; Matthew G Iadanza; Breanna S Vollmar; Tamir Gonen
Journal:  Curr Protoc Protein Sci       Date:  2013

Review 8.  The influence of lipids on voltage-gated ion channels.

Authors:  Qiu-Xing Jiang; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2012-04-05       Impact factor: 6.809

Review 9.  Cryo-electron microscopy--a primer for the non-microscopist.

Authors:  Jacqueline L S Milne; Mario J Borgnia; Alberto Bartesaghi; Erin E H Tran; Lesley A Earl; David M Schauder; Jeffrey Lengyel; Jason Pierson; Ardan Patwardhan; Sriram Subramaniam
Journal:  FEBS J       Date:  2012-12-17       Impact factor: 5.542

Review 10.  Two-Dimensional Crystallization Procedure, from Protein Expression to Sample Preparation.

Authors:  Qie Kuang; Pasi Purhonen; Hans Hebert
Journal:  Biomed Res Int       Date:  2015-08-27       Impact factor: 3.411
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