Literature DB >> 21068149

The roles of RNA in the synthesis of protein.

Peter B Moore1, Thomas A Steitz.   

Abstract

The crystal structures of ribosomes that have been obtained since 2000 have transformed our understanding of protein synthesis. In addition to proving that RNA is responsible for catalyzing peptide bond formation, these structures have provided important insights into the mechanistic details of how the ribosome functions. This review emphasizes what has been learned about the mechanism of peptide bond formation, the antibiotics that inhibit ribosome function, and the fidelity of decoding.

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Year:  2011        PMID: 21068149      PMCID: PMC3220363          DOI: 10.1101/cshperspect.a003780

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  76 in total

1.  Involvement of RNA in the synthesis of proteins.

Authors:  J D WATSON
Journal:  Science       Date:  1963-04-05       Impact factor: 47.728

2.  Substrate-assisted catalysis of peptide bond formation by the ribosome.

Authors:  Joshua S Weinger; K Mark Parnell; Silke Dorner; Rachel Green; Scott A Strobel
Journal:  Nat Struct Mol Biol       Date:  2004-10-10       Impact factor: 15.369

3.  Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs.

Authors:  T Xia; J SantaLucia; M E Burkard; R Kierzek; S J Schroeder; X Jiao; C Cox; D H Turner
Journal:  Biochemistry       Date:  1998-10-20       Impact factor: 3.162

Review 4.  Ribosomes and translation.

Authors:  R Green; H F Noller
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

Review 5.  Structure and evolution of mammalian ribosomal proteins.

Authors:  I G Wool; Y L Chan; A Glück
Journal:  Biochem Cell Biol       Date:  1995 Nov-Dec       Impact factor: 3.626

6.  A base pair between tRNA and 23S rRNA in the peptidyl transferase centre of the ribosome.

Authors:  R R Samaha; R Green; H F Noller
Journal:  Nature       Date:  1995-09-28       Impact factor: 49.962

7.  X-ray crystal structures of 70S ribosome functional complexes.

Authors:  J H Cate; M M Yusupov; G Z Yusupova; T N Earnest; H F Noller
Journal:  Science       Date:  1999-09-24       Impact factor: 47.728

8.  The gene encoding the elongation factor P protein is essential for viability and is required for protein synthesis.

Authors:  H Aoki; K Dekany; S L Adams; M C Ganoza
Journal:  J Biol Chem       Date:  1997-12-19       Impact factor: 5.157

9.  Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.

Authors:  Daqi Tu; Gregor Blaha; Peter B Moore; Thomas A Steitz
Journal:  Cell       Date:  2005-04-22       Impact factor: 41.582

10.  A 9 A resolution X-ray crystallographic map of the large ribosomal subunit.

Authors:  N Ban; B Freeborn; P Nissen; P Penczek; R A Grassucci; R Sweet; J Frank; P B Moore; T A Steitz
Journal:  Cell       Date:  1998-06-26       Impact factor: 41.582

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  30 in total

1.  Hypothesis: emergence of translation as a result of RNA helicase evolution.

Authors:  Nikolay Zenkin
Journal:  J Mol Evol       Date:  2012-04-28       Impact factor: 2.395

Review 2.  Folding and finding RNA secondary structure.

Authors:  David H Mathews; Walter N Moss; Douglas H Turner
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-08-04       Impact factor: 10.005

3.  Evolution of protein synthesis from an RNA world.

Authors:  Harry F Noller
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-04-01       Impact factor: 10.005

Review 4.  Setting the stage: the history, chemistry, and geobiology behind RNA.

Authors:  Steven A Benner; Hyo-Joong Kim; Zunyi Yang
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-01-01       Impact factor: 10.005

5.  RNA secondary structure prediction using high-throughput SHAPE.

Authors:  Sabrina Lusvarghi; Joanna Sztuba-Solinska; Katarzyna J Purzycka; Jason W Rausch; Stuart F J Le Grice
Journal:  J Vis Exp       Date:  2013-05-31       Impact factor: 1.355

6.  The RNA worlds in context.

Authors:  Thomas R Cech
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-07-01       Impact factor: 10.005

Review 7.  Regulation of Ribosome Biogenesis in Skeletal Muscle Hypertrophy.

Authors:  Vandré Casagrande Figueiredo; John J McCarthy
Journal:  Physiology (Bethesda)       Date:  2019-01-01

8.  EF-G catalyzes tRNA translocation by disrupting interactions between decoding center and codon-anticodon duplex.

Authors:  Guangqiao Liu; Guangtao Song; Danyang Zhang; Dejiu Zhang; Zhikai Li; Zhixin Lyu; Jianshu Dong; John Achenbach; Weimin Gong; Xin Sheng Zhao; Knud H Nierhaus; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2014-08-10       Impact factor: 15.369

9.  Quantifying the Relationship between Single-Molecule Probes and Subunit Rotation in the Ribosome.

Authors:  Mariana Levi; Kien Nguyen; Liah Dukaye; Paul Charles Whitford
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033

Review 10.  Adverse effects of antimicrobials via predictable or idiosyncratic inhibition of host mitochondrial components.

Authors:  Alison E Barnhill; Matt T Brewer; Steve A Carlson
Journal:  Antimicrob Agents Chemother       Date:  2012-05-21       Impact factor: 5.191

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