Literature DB >> 8722009

Structure and evolution of mammalian ribosomal proteins.

I G Wool1, Y L Chan, A Glück.   

Abstract

Mammalian (rat) ribosomes have 80 proteins; the sequence of amino acids in 75 have been determined. What has been learned of the structure of the rat ribosomal proteins is reviewed with particular attention to their evolution and to amino acid sequence motifs. The latter include: clusters of basic or acidic residues; sequence repeats or shared sequences; zinc finger domains; bZIP elements; and nuclear localization signals. The occurrence and the possible significance of phosphorylated residues and of ubiquitin extensions is noted. The characteristics of the mRNAs that encode the proteins are summarized. The relationship of the rat ribosomal proteins to the proteins in ribosomes from humans, yeast, archaebacteria, and Escherichia coli is collated.

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Year:  1995        PMID: 8722009     DOI: 10.1139/o95-101

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  95 in total

1.  Knowledge-based analysis of microarray gene expression data by using support vector machines.

Authors:  M P Brown; W N Grundy; D Lin; N Cristianini; C W Sugnet; T S Furey; M Ares; D Haussler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Predicted highly expressed genes of diverse prokaryotic genomes.

Authors:  S Karlin; J Mrázek
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

3.  Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome.

Authors:  Zhaolei Zhang; Paul M Harrison; Yin Liu; Mark Gerstein
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

4.  Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome.

Authors:  Zhaolei Zhang; Paul Harrison; Mark Gerstein
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

5.  Patterns of nucleotide substitution, insertion and deletion in the human genome inferred from pseudogenes.

Authors:  Zhaolei Zhang; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2003-09-15       Impact factor: 16.971

6.  Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale.

Authors:  Odile Lecompte; Raymond Ripp; Jean-Claude Thierry; Dino Moras; Olivier Poch
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

Review 7.  The roles of RNA in the synthesis of protein.

Authors:  Peter B Moore; Thomas A Steitz
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-11-01       Impact factor: 10.005

8.  High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.

Authors:  Patrick Giavalisco; Daniel Wilson; Thomas Kreitler; Hans Lehrach; Joachim Klose; Johan Gobom; Paola Fucini
Journal:  Plant Mol Biol       Date:  2005-03       Impact factor: 4.076

9.  Dynamic changes in ribosome-associated proteome and phosphoproteome during deoxynivalenol-induced translation inhibition and ribotoxic stress.

Authors:  Xiao Pan; Douglas A Whitten; Curtis G Wilkerson; James J Pestka
Journal:  Toxicol Sci       Date:  2013-11-27       Impact factor: 4.849

10.  Comparative analysis of the ribosomal components of the hydrogenosome-containing protist, Trichomonas vaginalis.

Authors:  Nobuko Arisue; Yasushi Maki; Hideji Yoshida; Akira Wada; Lidya B Sánchez; Miklós Müller; Tetsuo Hashimoto
Journal:  J Mol Evol       Date:  2004-07       Impact factor: 2.395

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