Literature DB >> 20887857

Liposomes on a streptavidin crystal: a system to study membrane proteins by cryo-EM.

Liguo Wang1, Fred J Sigworth.   

Abstract

In this chapter, we describe the preparation of cryo-EM specimens for random spherically constrained (RSC) single-particle reconstruction of membrane proteins. The specimen consists of liposomes into which the purified membrane protein is reconstituted at low density. The substrate is a 2D streptavidin crystal, which serves as an affinity surface that tethers the liposomes, which are doped with biotinylated lipids; the crystal can also serve as an image-quality and image-calibration reference. After subtraction of the crystal and lipid membrane contributions to the image, the remaining particle images can be used for 3D reconstruction.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20887857      PMCID: PMC3903115          DOI: 10.1016/S0076-6879(10)81007-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  24 in total

1.  A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.

Authors:  S Freitag; V Chu; J E Penzotti; L A Klumb; R To; D Hyre; I Le Trong; T P Lybrand; R E Stenkamp; P S Stayton
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Using cryo-EM to measure the dipole potential of a lipid membrane.

Authors:  Liguo Wang; Pulkit S Bose; Fred J Sigworth
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-20       Impact factor: 11.205

3.  Crystallographic analysis of a full-length streptavidin with its C-terminal polypeptide bound in the biotin binding site.

Authors:  Isolde Le Trong; Nicolas Humbert; Thomas R Ward; Ronald E Stenkamp
Journal:  J Mol Biol       Date:  2005-12-15       Impact factor: 5.469

4.  FREALIGN: high-resolution refinement of single particle structures.

Authors:  Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2006-06-02       Impact factor: 2.867

5.  Holey carbon micro-arrays for transmission electron microscopy: a microcontact printing approach.

Authors:  David W Chester; James F Klemic; Eric Stern; Fred J Sigworth; Kathryn G Klemic
Journal:  Ultramicroscopy       Date:  2007-01-30       Impact factor: 2.689

6.  Portability of paddle motif function and pharmacology in voltage sensors.

Authors:  Abdulrasheed A Alabi; Maria Isabel Bahamonde; Hoi Jong Jung; Jae Il Kim; Kenton J Swartz
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

7.  Functional reconstitution of bacterially expressed human potassium channels in proteoliposomes: membrane potential measurements with JC-1 to assay ion channel activity.

Authors:  B Chanda; M K Mathew
Journal:  Biochim Biophys Acta       Date:  1999-01-12

8.  Structural studies of the streptavidin binding loop.

Authors:  S Freitag; I Le Trong; L Klumb; P S Stayton; R E Stenkamp
Journal:  Protein Sci       Date:  1997-06       Impact factor: 6.725

9.  Molecular dynamics study of unbinding of the avidin-biotin complex.

Authors:  S Izrailev; S Stepaniants; M Balsera; Y Oono; K Schulten
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

10.  Structural basis of pore formation by the bacterial toxin pneumolysin.

Authors:  Sarah J Tilley; Elena V Orlova; Robert J C Gilbert; Peter W Andrew; Helen R Saibil
Journal:  Cell       Date:  2005-04-22       Impact factor: 41.582

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  14 in total

1.  Single-particle electron microscopy in the study of membrane protein structure.

Authors:  Rita De Zorzi; Wei Mi; Maofu Liao; Thomas Walz
Journal:  Microscopy (Oxf)       Date:  2015-10-15       Impact factor: 1.571

Review 2.  Structure of IP3R channel: high-resolution insights from cryo-EM.

Authors:  Mariah R Baker; Guizhen Fan; Irina I Serysheva
Journal:  Curr Opin Struct Biol       Date:  2017-06-12       Impact factor: 6.809

3.  Long shelf-life streptavidin support-films suitable for electron microscopy of biological macromolecules.

Authors:  Bong-Gyoon Han; Zoe Watson; Hannah Kang; Arto Pulk; Kenneth H Downing; Jamie Cate; Robert M Glaeser
Journal:  J Struct Biol       Date:  2016-06-15       Impact factor: 2.867

4.  Monolayer-crystal streptavidin support films provide an internal standard of cryo-EM image quality.

Authors:  Bong-Gyoon Han; Zoe Watson; Jamie H D Cate; Robert M Glaeser
Journal:  J Struct Biol       Date:  2017-03-01       Impact factor: 2.867

Review 5.  Membrane mimetic systems in CryoEM: keeping membrane proteins in their native environment.

Authors:  Henriette E Autzen; David Julius; Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2019-07-03       Impact factor: 6.809

6.  From Tube to Structure: SPA Cryo-EM Workflow Using Apoferritin as an Example.

Authors:  Christoph A Diebolder; Rebecca S Dillard; Ludovic Renault
Journal:  Methods Mol Biol       Date:  2021

7.  Automatic cryo-EM particle selection for membrane proteins in spherical liposomes.

Authors:  Yunhui Liu; Fred J Sigworth
Journal:  J Struct Biol       Date:  2014-01-24       Impact factor: 2.867

8.  Minimizing electrostatic charging of an aperture used to produce in-focus phase contrast in the TEM.

Authors:  Robert M Glaeser; Simone Sassolini; Rossana Cambie; Jian Jin; Stefano Cabrini; Andreas K Schmid; Radostin Danev; Bart Buijsse; Roseann Csencsits; Kenneth H Downing; David M Larson; Dieter Typke; B G Han
Journal:  Ultramicroscopy       Date:  2013-06-08       Impact factor: 2.689

9.  Removal of Vesicle Structures From Transmission Electron Microscope Images.

Authors:  Katrine Hommelhoff Jensen; Fred J Sigworth; Sami Sebastian Brandt
Journal:  IEEE Trans Image Process       Date:  2015-12-03       Impact factor: 10.856

10.  PROTEINS, INTERFACES, AND CRYO-EM GRIDS.

Authors:  Robert M Glaeser
Journal:  Curr Opin Colloid Interface Sci       Date:  2017-12-22       Impact factor: 6.448

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