Literature DB >> 28618351

Structure of IP3R channel: high-resolution insights from cryo-EM.

Mariah R Baker1, Guizhen Fan1, Irina I Serysheva2.   

Abstract

Inositol 1,4,5-trisphosphate receptors (IP3Rs) are ubiquitously expressed intracellular Ca2+ channels and the major mediators of cellular Ca2+ signals generated by the release of Ca2+ ions from intracellular stores in response to a variety of extracellular stimuli. Despite established physiological significance and proven involvements of IP3R channels in many human diseases, detailed structural basis for signal detection by these ion channels and their gating remain obscure. Recently, single particle electron cryomicroscopy (cryo-EM) has yielded a long-awaited near-atomic resolution structure of the entire full-length type 1 IP3R. This structure provided exciting mechanistic insights into the molecular assembly of IP3R, revealing the pronounced structural conservation of Ca2+ release channels and raising many fundamental and controversial questions on their activation and gating. Here we summarize the major technological advances that propelled our cryo-EM analysis of IP3R to near-atomic resolution and discuss what the future holds for structural biology of Ca2+ release channels.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28618351      PMCID: PMC5683905          DOI: 10.1016/j.sbi.2017.05.014

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  56 in total

Review 1.  IP(3) receptors: toward understanding their activation.

Authors:  Colin W Taylor; Stephen C Tovey
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-10-27       Impact factor: 10.005

2.  CaBP1, a neuronal Ca2+ sensor protein, inhibits inositol trisphosphate receptors by clamping intersubunit interactions.

Authors:  Congmin Li; Masahiro Enomoto; Ana M Rossi; Min-Duk Seo; Taufiq Rahman; Peter B Stathopulos; Colin W Taylor; Mitsuhiko Ikura; James B Ames
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-06       Impact factor: 11.205

3.  Type I, II, and III inositol 1,4,5-trisphosphate receptors are unequally susceptible to down-regulation and are expressed in markedly different proportions in different cell types.

Authors:  R J Wojcikiewicz
Journal:  J Biol Chem       Date:  1995-05-12       Impact factor: 5.157

4.  Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.

Authors:  Doreen Matthies; Olivier Dalmas; Mario J Borgnia; Pawel K Dominik; Alan Merk; Prashant Rao; Bharat G Reddy; Shahidul Islam; Alberto Bartesaghi; Eduardo Perozo; Sriram Subramaniam
Journal:  Cell       Date:  2016-02-11       Impact factor: 41.582

5.  Three-dimensional rearrangements within inositol 1,4,5-trisphosphate receptor by calcium.

Authors:  Kozo Hamada; Akiko Terauchi; Katsuhiko Mikoshiba
Journal:  J Biol Chem       Date:  2003-10-30       Impact factor: 5.157

6.  Validation of cryo-EM structure of IP₃R1 channel.

Authors:  Stephen C Murray; John Flanagan; Olga B Popova; Wah Chiu; Steven J Ludtke; Irina I Serysheva
Journal:  Structure       Date:  2013-05-23       Impact factor: 5.006

7.  Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.

Authors:  Ivan Bosanac; Jean-René Alattia; Tapas K Mal; Jenny Chan; Susanna Talarico; Frances K Tong; Kit I Tong; Fumio Yoshikawa; Teiichi Furuichi; Miwako Iwai; Takayuki Michikawa; Katsuhiko Mikoshiba; Mitsuhiko Ikura
Journal:  Nature       Date:  2002-11-17       Impact factor: 49.962

8.  Domain organization of the type 1 inositol 1,4,5-trisphosphate receptor as revealed by single-particle analysis.

Authors:  Paula C A da Fonseca; Stephen A Morris; Edmund P Nerou; Colin W Taylor; Edward P Morris
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-21       Impact factor: 11.205

9.  TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.

Authors:  Yuan Gao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2016-05-18       Impact factor: 49.962

10.  Structural insights into Ca(2+)-activated long-range allosteric channel gating of RyR1.

Authors:  Risheng Wei; Xue Wang; Yan Zhang; Saptarshi Mukherjee; Lei Zhang; Qiang Chen; Xinrui Huang; Shan Jing; Congcong Liu; Shuang Li; Guangyu Wang; Yaofang Xu; Sujie Zhu; Alan J Williams; Fei Sun; Chang-Cheng Yin
Journal:  Cell Res       Date:  2016-08-30       Impact factor: 25.617

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  14 in total

1.  Inositol 1,4,5-trisphosphate Receptor Mutations associated with Human Disease.

Authors:  Lara E Terry; Kamil J Alzayady; Esraa Furati; David I Yule
Journal:  Messenger (Los Angel)       Date:  2018-06

Review 2.  Lipid environment of membrane proteins in cryo-EM based structural analysis.

Authors:  Kazuhiro Mio; Chikara Sato
Journal:  Biophys Rev       Date:  2017-12-18

3.  Functional determination of calcium-binding sites required for the activation of inositol 1,4,5-trisphosphate receptors.

Authors:  Vikas Arige; Lara E Terry; Larry E Wagner; Sundeep Malik; Mariah R Baker; Guizhen Fan; Suresh K Joseph; Irina I Serysheva; David I Yule
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-19       Impact factor: 12.779

Review 4.  Abnormalities of synaptic mitochondria in autism spectrum disorder and related neurodevelopmental disorders.

Authors:  Liliana Rojas-Charry; Leonardo Nardi; Axel Methner; Michael J Schmeisser
Journal:  J Mol Med (Berl)       Date:  2020-12-18       Impact factor: 4.599

Review 5.  The structural basis of ryanodine receptor ion channel function.

Authors:  Gerhard Meissner
Journal:  J Gen Physiol       Date:  2017-11-09       Impact factor: 4.086

6.  Cryo-EM reveals ligand induced allostery underlying InsP3R channel gating.

Authors:  Guizhen Fan; Mariah R Baker; Zhao Wang; Alexander B Seryshev; Steven J Ludtke; Matthew L Baker; Irina I Serysheva
Journal:  Cell Res       Date:  2018-11-23       Impact factor: 25.617

Review 7.  miR-133: A Suppressor of Cardiac Remodeling?

Authors:  Ning Li; Heng Zhou; Qizhu Tang
Journal:  Front Pharmacol       Date:  2018-08-17       Impact factor: 5.810

Review 8.  Inositol 1,4,5-trisphosphate receptor in the liver: Expression and function.

Authors:  Fernanda de Oliveira Lemos; Rodrigo M Florentino; Antônio Carlos Melo Lima Filho; Marcone Loiola Dos Santos; M Fatima Leite
Journal:  World J Gastroenterol       Date:  2019-11-28       Impact factor: 5.742

Review 9.  IP3R Channels in Male Reproduction.

Authors:  Xiaoning Zhang; Rongzu Huang; Yang Zhou; Wenwen Zhou; Xuhui Zeng
Journal:  Int J Mol Sci       Date:  2020-12-02       Impact factor: 5.923

10.  Association of the IP3R to STIM1 provides a reduced intraluminal calcium microenvironment, resulting in enhanced store-operated calcium entry.

Authors:  Alicia Sampieri; Karla Santoyo; Alexander Asanov; Luis Vaca
Journal:  Sci Rep       Date:  2018-09-05       Impact factor: 4.379

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