Literature DB >> 20865803

Ice as a protocellular medium for RNA replication.

James Attwater1, Aniela Wochner, Vitor B Pinheiro, Alan Coulson, Philipp Holliger.   

Abstract

A crucial transition in the origin of life was the emergence of an informational polymer capable of self-replication and its compartmentalization within protocellular structures. We show that the physicochemical properties of ice, a simple medium widespread on a temperate early Earth, could have mediated this transition prior to the advent of membraneous protocells. Ice not only promotes the activity of an RNA polymerase ribozyme but also protects it from hydrolytic degradation, enabling the synthesis of exceptionally long replication products. Ice furthermore relieves the dependence of RNA replication on prebiotically implausible substrate concentrations, while providing quasicellular compartmentalization within the intricate microstructure of the eutectic phase. Eutectic ice phases had previously been shown to promote the de novo synthesis of nucleotide precursors, as well as the condensation of activated nucleotides into random RNA oligomers. Our results support a wider role for ice as a predisposed environment, promoting all the steps from prebiotic synthesis to the emergence of RNA self-replication and precellular Darwinian evolution.

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Year:  2010        PMID: 20865803     DOI: 10.1038/ncomms1076

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  47 in total

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Authors:  T Vajda
Journal:  Cell Mol Life Sci       Date:  1999-10-30       Impact factor: 9.261

Review 2.  The antiquity of RNA-based evolution.

Authors:  Gerald F Joyce
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

3.  Ligation activity of fragmented ribozymes in frozen solution: implications for the RNA world.

Authors:  Alexander V Vlassov; Brian H Johnston; Laura F Landweber; Sergei A Kazakov
Journal:  Nucleic Acids Res       Date:  2004-05-25       Impact factor: 16.971

4.  Stochastic simulation of chemical reactions with spatial resolution and single molecule detail.

Authors:  Steven S Andrews; Dennis Bray
Journal:  Phys Biol       Date:  2004-12       Impact factor: 2.583

Review 5.  Evolutionary origins and directed evolution of RNA.

Authors:  Andrew D Ellington; Xi Chen; Michael Robertson; Angel Syrett
Journal:  Int J Biochem Cell Biol       Date:  2008-08-19       Impact factor: 5.085

6.  The origin of life: chemical evolution of a metabolic system in a mineral honeycomb?

Authors:  Sergio Branciamore; Enzo Gallori; Eörs Szathmáry; Tamás Czárán
Journal:  J Mol Evol       Date:  2009-10-06       Impact factor: 2.395

7.  The cspA mRNA is a thermosensor that modulates translation of the cold-shock protein CspA.

Authors:  Anna Maria Giuliodori; Fabio Di Pietro; Stefano Marzi; Benoit Masquida; Rolf Wagner; Pascale Romby; Claudio O Gualerzi; Cynthia L Pon
Journal:  Mol Cell       Date:  2010-01-15       Impact factor: 17.970

8.  Hofmeister salt effects on surface tension arise from partitioning of anions and cations between bulk water and the air-water interface.

Authors:  Laurel M Pegram; M Thomas Record
Journal:  J Phys Chem B       Date:  2007-04-14       Impact factor: 2.991

9.  Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.

Authors:  Matthew W Powner; Béatrice Gerland; John D Sutherland
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

10.  Metal-ion catalyzed polymerization in the eutectic phase in water-ice: a possible approach to template-directed RNA polymerization.

Authors:  Pierre-Alain Monnard; Jack W Szostak
Journal:  J Inorg Biochem       Date:  2008-02-01       Impact factor: 4.155

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  43 in total

1.  Origin of life: Cold-hearted RNA heats up life.

Authors:  Niles Lehman
Journal:  Nat Chem       Date:  2013-12       Impact factor: 24.427

2.  Oligomerization of a Bimolecular Ribozyme Modestly Rescues its Structural Defects that Disturb Interdomain Assembly to Form the Catalytic Site.

Authors:  Md Motiar Rahman; Shigeyoshi Matsumura; Yoshiya Ikawa
Journal:  J Mol Evol       Date:  2018-08-14       Impact factor: 2.395

3.  Ligation of RNA Oligomers by the Schistosoma mansoni Hammerhead Ribozyme in Frozen Solution.

Authors:  Lively Lie; Shweta Biliya; Fredrik Vannberg; Roger M Wartell
Journal:  J Mol Evol       Date:  2016-02-20       Impact factor: 2.395

4.  Darwinian behavior in a cold, sporadically fed pool of ribonucleotides.

Authors:  Michael Yarus
Journal:  Astrobiology       Date:  2012-09-04       Impact factor: 4.335

5.  Models of Replicator Proliferation Involving Differential Replicator Subunit Stability.

Authors:  Zewei Li; Runhe Lyu; John Tower
Journal:  Orig Life Evol Biosph       Date:  2018-09-10       Impact factor: 1.950

6.  Sulfidic Anion Concentrations on Early Earth for Surficial Origins-of-Life Chemistry.

Authors:  Sukrit Ranjan; Zoe R Todd; John D Sutherland; Dimitar D Sasselov
Journal:  Astrobiology       Date:  2018-04-08       Impact factor: 4.335

7.  Simple peptides derived from the ribosomal core potentiate RNA polymerase ribozyme function.

Authors:  Shunsuke Tagami; James Attwater; Philipp Holliger
Journal:  Nat Chem       Date:  2017-03-06       Impact factor: 24.427

8.  Nonenzymatic gluconeogenesis-like formation of fructose 1,6-bisphosphate in ice.

Authors:  Christoph B Messner; Paul C Driscoll; Gabriel Piedrafita; Michael F L De Volder; Markus Ralser
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

9.  Freeze-thaw cycles as drivers of complex ribozyme assembly.

Authors:  Hannes Mutschler; Aniela Wochner; Philipp Holliger
Journal:  Nat Chem       Date:  2015-05-04       Impact factor: 24.427

10.  In-ice evolution of RNA polymerase ribozyme activity.

Authors:  James Attwater; Aniela Wochner; Philipp Holliger
Journal:  Nat Chem       Date:  2013-10-20       Impact factor: 24.427

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