Literature DB >> 28652321

Nonenzymatic gluconeogenesis-like formation of fructose 1,6-bisphosphate in ice.

Christoph B Messner1,2, Paul C Driscoll3, Gabriel Piedrafita2,4, Michael F L De Volder5, Markus Ralser6,2.   

Abstract

The evolutionary origins of metabolism, in particular the emergence of the sugar phosphates that constitute glycolysis, the pentose phosphate pathway, and the RNA and DNA backbone, are largely unknown. In cells, a major source of glucose and the large sugar phosphates is gluconeogenesis. This ancient anabolic pathway (re-)builds carbon bonds as cleaved in glycolysis in an aldol condensation of the unstable catabolites glyceraldehyde 3-phosphate and dihydroxyacetone phosphate, forming the much more stable fructose 1,6-bisphosphate. We here report the discovery of a nonenzymatic counterpart to this reaction. The in-ice nonenzymatic aldol addition leads to the continuous accumulation of fructose 1,6-bisphosphate in a permanently frozen solution as followed over months. Moreover, the in-ice reaction is accelerated by simple amino acids, in particular glycine and lysine. Revealing that gluconeogenesis may be of nonenzymatic origin, our results shed light on how glucose anabolism could have emerged in early life forms. Furthermore, the amino acid acceleration of a key cellular anabolic reaction may indicate a link between prebiotic chemistry and the nature of the first metabolic enzymes.

Entities:  

Keywords:  evolution; gluconeogenesis; metabolism; nonenzymatic reactions; origin of metabolism

Mesh:

Substances:

Year:  2017        PMID: 28652321      PMCID: PMC5514728          DOI: 10.1073/pnas.1702274114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

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Authors:  Rafael F Say; Georg Fuchs
Journal:  Nature       Date:  2010-03-28       Impact factor: 49.962

5.  The crystal structure of a class II fructose-1,6-bisphosphate aldolase shows a novel binuclear metal-binding active site embedded in a familiar fold.

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Journal:  Structure       Date:  1996-11-15       Impact factor: 5.006

6.  Molecular architecture of rabbit skeletal muscle aldolase at 2.7-A resolution.

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Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

7.  Prebiotic synthesis of phosphoenol pyruvate by α-phosphorylation-controlled triose glycolysis.

Authors:  Adam J Coggins; Matthew W Powner
Journal:  Nat Chem       Date:  2016-10-10       Impact factor: 24.427

8.  Iron catalysis at the origin of life.

Authors:  Eloi Camprubi; Sean F Jordan; Rafaela Vasiliadou; Nick Lane
Journal:  IUBMB Life       Date:  2017-05-03       Impact factor: 3.885

9.  Prebiotic adenine synthesis via HCN oligomerization in ice.

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Journal:  Biosystems       Date:  1982       Impact factor: 1.973

10.  Sulfate radicals enable a non-enzymatic Krebs cycle precursor.

Authors:  Markus A Keller; Domen Kampjut; Stuart A Harrison; Markus Ralser
Journal:  Nat Ecol Evol       Date:  2017-03-13       Impact factor: 15.460

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  9 in total

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Journal:  PLoS Biol       Date:  2022-10-04       Impact factor: 9.593

3.  Acetyl Phosphate as a Primordial Energy Currency at the Origin of Life.

Authors:  Alexandra Whicher; Eloi Camprubi; Silvana Pinna; Barry Herschy; Nick Lane
Journal:  Orig Life Evol Biosph       Date:  2018-03-03       Impact factor: 1.950

4.  Cysteine and iron accelerate the formation of ribose-5-phosphate, providing insights into the evolutionary origins of the metabolic network structure.

Authors:  Gabriel Piedrafita; Sreejith J Varma; Cecilia Castro; Christoph B Messner; Lukasz Szyrwiel; Julian L Griffin; Markus Ralser
Journal:  PLoS Biol       Date:  2021-12-03       Impact factor: 8.029

5.  A Nonenzymatic Analog of Pyrimidine Nucleobase Biosynthesis.

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6.  Positively charged mineral surfaces promoted the accumulation of organic intermediates at the origin of metabolism.

Authors:  Amir Akbari; Bernhard O Palsson
Journal:  PLoS Comput Biol       Date:  2022-08-17       Impact factor: 4.779

Review 7.  An appeal to magic? The discovery of a non-enzymatic metabolism and its role in the origins of life.

Authors:  Markus Ralser
Journal:  Biochem J       Date:  2018-08-30       Impact factor: 3.857

Review 8.  Designing and interpreting 'multi-omic' experiments that may change our understanding of biology.

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Journal:  Curr Opin Syst Biol       Date:  2017-12

9.  Computational Analysis of a Prebiotic Amino Acid Synthesis with Reference to Extant Codon-Amino Acid Relationships.

Authors:  Tolga Yaman; Jeremy N Harvey
Journal:  Life (Basel)       Date:  2021-12-04
  9 in total

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