Literature DB >> 20461232

Hyperquenching for protein cryocrystallography.

Matthew Warkentin1, Viatcheslav Berejnov, Naji S Husseini, Robert E Thorne.   

Abstract

When samples having volumes characteristic of protein crystals are plunge cooled in liquid nitrogen or propane, most cooling occurs in the cold gas layer above the liquid. By removing this cold gas layer, cooling rates for small samples and modest plunge velocities are increased to 1.5 × 10(4) K s(-1), with increases of a factor of 100 over current best practice possible with 10 μm samples. Glycerol concentrations required to eliminate water crystallization in protein-free aqueous mixtures drop from ∼28% w/v to as low as 6% w/v. These results will allow many crystals to go from crystallization tray to liquid cryogen to X-ray beam without cryoprotectants. By reducing or eliminating the need for cryoprotectants in growth solutions, they may also simplify the search for crystallization conditions and for optimal screens. The results presented here resolve many puzzles, such as why plunge cooling in liquid nitrogen or propane has, until now, not yielded significantly better diffraction quality than gas-stream cooling.

Entities:  

Year:  2006        PMID: 20461232      PMCID: PMC2866519          DOI: 10.1107/S0021889806037484

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN: 0021-8898            Impact factor:   3.304


  31 in total

1.  Flash-cooling and annealing of protein crystals.

Authors:  S Kriminski; C L Caylor; M C Nonato; K D Finkelstein; R E Thorne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-02-21

2.  Glass formation criterion for various glass-forming systems.

Authors:  Z P Lu; C T Liu
Journal:  Phys Rev Lett       Date:  2003-09-10       Impact factor: 9.161

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1995-01-01

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Authors:  Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-29       Impact factor: 11.205

Review 5.  Cryocooling and radiation damage in macromolecular crystallography.

Authors:  Elspeth F Garman; Robin Leslie Owen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 6.  Cryo-cooling in macromolecular crystallography: advantages, disadvantages and optimization.

Authors:  Douglas H Juers; Brian W Matthews
Journal:  Q Rev Biophys       Date:  2004-05       Impact factor: 5.318

7.  1.59 A structure of trypsin at 120 K: comparison of low temperature and room temperature structures.

Authors:  T Earnest; E Fauman; C S Craik; R Stroud
Journal:  Proteins       Date:  1991

8.  State of water at 136 K determined by its relaxation time.

Authors:  G P Johari
Journal:  Phys Chem Chem Phys       Date:  2005-03-21       Impact factor: 3.676

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Authors:  H Hope
Journal:  Annu Rev Biophys Biophys Chem       Date:  1990

10.  The pre-hydrolysis state of p21(ras) in complex with GTP: new insights into the role of water molecules in the GTP hydrolysis reaction of ras-like proteins.

Authors:  A J Scheidig; C Burmester; R S Goody
Journal:  Structure       Date:  1999-11-15       Impact factor: 5.006

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  36 in total

1.  Glass transition in thaumatin crystals revealed through temperature-dependent radiation-sensitivity measurements.

Authors:  Matthew Warkentin; Robert E Thorne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-09-18

2.  Effect of common cryoprotectants on critical warming rates and ice formation in aqueous solutions.

Authors:  Jesse B Hopkins; Ryan Badeau; Matthew Warkentin; Robert E Thorne
Journal:  Cryobiology       Date:  2012-06-19       Impact factor: 2.487

3.  Measuring the Densities of Aqueous Glasses at Cryogenic Temperatures.

Authors:  Chen Shen; Ethan F Julius; Timothy J Tyree; Ritwik Dan; David W Moreau; Robert Thorne
Journal:  J Vis Exp       Date:  2017-06-28       Impact factor: 1.355

Review 4.  Automated robotic harvesting of protein crystals-addressing a critical bottleneck or instrumentation overkill?

Authors:  Robert Viola; Peter Carman; Jace Walsh; Daniel Frankel; Bernhard Rupp
Journal:  J Struct Funct Genomics       Date:  2007-10-27

Review 5.  A general method for hyperquenching protein crystals.

Authors:  Matthew Warkentin; Robert E Thorne
Journal:  J Struct Funct Genomics       Date:  2007-10-19

6.  Crystallization and preliminary characterization of the Thermus thermophilus RNA helicase Hera C-terminal domain.

Authors:  Markus G Rudolph; Julia G Wittmann; Dagmar Klostermeier
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-02-14

7.  Cryocrystallography in capillaries: critical glycerol concentrations and cooling rates.

Authors:  Matthew Warkentin; Valentina Stanislavskaia; Katherine Hammes; Robert E Thorne
Journal:  J Appl Crystallogr       Date:  2008-07-01       Impact factor: 3.304

8.  Slow cooling of protein crystals.

Authors:  Matthew Warkentin; Robert E Thorne
Journal:  J Appl Crystallogr       Date:  2009-08-01       Impact factor: 3.304

9.  First experiences with semi-autonomous robotic harvesting of protein crystals.

Authors:  Robert Viola; Jace Walsh; Alex Melka; Wesley Womack; Sean Murphy; Alan Riboldi-Tunnicliffe; Bernhard Rupp
Journal:  J Struct Funct Genomics       Date:  2011-03-23

10.  Slow cooling and temperature-controlled protein crystallography.

Authors:  Matthew Warkentin; Robert E Thorne
Journal:  J Struct Funct Genomics       Date:  2009-12-10
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