Literature DB >> 20209048

Clustering Fiber Traces Using Normalized Cuts.

Anders Brun1, Hans Knutsson, Hae-Jeong Park, Martha E Shenton, Carl-Fredrik Westin.   

Abstract

In this paper we present a framework for unsupervised segmentation of white matter fiber traces obtained from diffusion weighted MRI data. Fiber traces are compared pairwise to create a weighted undirected graph which is partitioned into coherent sets using the normalized cut (N cut) criterion. A simple and yet effective method for pairwise comparison of fiber traces is presented which in combination with the N cut criterion is shown to produce plausible segmentations of both synthetic and real fiber trace data. Segmentations are visualized as colored stream-tubes or transformed to a segmentation of voxel space, revealing structures in a way that looks promising for future explorative studies of diffusion weighted MRI data.

Year:  2004        PMID: 20209048      PMCID: PMC3296487          DOI: 10.1007/b100265

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

Review 2.  Processing and visualization for diffusion tensor MRI.

Authors:  C-F Westin; S E Maier; H Mamata; A Nabavi; F A Jolesz; R Kikinis
Journal:  Med Image Anal       Date:  2002-06       Impact factor: 8.545

3.  Virtual in vivo interactive dissection of white matter fasciculi in the human brain.

Authors:  Marco Catani; Robert J Howard; Sinisa Pajevic; Derek K Jones
Journal:  Neuroimage       Date:  2002-09       Impact factor: 6.556

4.  Classification and quantification of neuronal fiber pathways using diffusion tensor MRI.

Authors:  Zhaohua Ding; John C Gore; Adam W Anderson
Journal:  Magn Reson Med       Date:  2003-04       Impact factor: 4.668

5.  Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging.

Authors:  T E J Behrens; H Johansen-Berg; M W Woolrich; S M Smith; C A M Wheeler-Kingshott; P A Boulby; G J Barker; E L Sillery; K Sheehan; O Ciccarelli; A J Thompson; J M Brady; P M Matthews
Journal:  Nat Neurosci       Date:  2003-07       Impact factor: 24.884

Review 6.  Inferring microstructural features and the physiological state of tissues from diffusion-weighted images.

Authors:  P J Basser
Journal:  NMR Biomed       Date:  1995 Nov-Dec       Impact factor: 4.044

7.  MR imaging of intravoxel incoherent motions: application to diffusion and perfusion in neurologic disorders.

Authors:  D Le Bihan; E Breton; D Lallemand; P Grenier; E Cabanis; M Laval-Jeantet
Journal:  Radiology       Date:  1986-11       Impact factor: 11.105

  7 in total
  39 in total

1.  Tractography segmentation using a hierarchical Dirichlet processes mixture model.

Authors:  Xiaogang Wang; W Eric L Grimson; Carl-Fredrik Westin
Journal:  Neuroimage       Date:  2010-08-01       Impact factor: 6.556

2.  Corpus callosal connection mapping using cortical gray matter parcellation and DT-MRI.

Authors:  Hae-Jeong Park; Jae Jin Kim; Seung-Koo Lee; Jeong Ho Seok; Jiwon Chun; Dong Ik Kim; Jong Doo Lee
Journal:  Hum Brain Mapp       Date:  2008-05       Impact factor: 5.038

3.  A method for clustering white matter fiber tracts.

Authors:  L J O'Donnell; M Kubicki; M E Shenton; M H Dreusicke; W E L Grimson; C F Westin
Journal:  AJNR Am J Neuroradiol       Date:  2006-05       Impact factor: 3.825

Review 4.  An image-processing toolset for diffusion tensor tractography.

Authors:  Arabinda Mishra; Yonggang Lu; Ann S Choe; Akram Aldroubi; John C Gore; Adam W Anderson; Zhaohua Ding
Journal:  Magn Reson Imaging       Date:  2006-11-20       Impact factor: 2.546

5.  Fiber bundle estimation and parameterization.

Authors:  Marc Niethammer; Sylvain Bouix; Carl-Fredrik Westin; Martha E Shenton
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

6.  A kernel-based approach for user-guided fiber bundling using diffusion tensor data.

Authors:  Raúl San José Estépar; Marek Kubicki; Martha Shenton; Carl-Fredrik Westin
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

7.  Probabilistic clustering and quantitative analysis of white matter fiber tracts.

Authors:  Mahnaz Maddah; William M Wells; Simon K Warfield; Carl-Fredrik Westin; W Eric L Grimson
Journal:  Inf Process Med Imaging       Date:  2007

8.  A unified framework for clustering and quantitative analysis of white matter fiber tracts.

Authors:  Mahnaz Maddah; W Eric L Grimson; Simon K Warfield; William M Wells
Journal:  Med Image Anal       Date:  2007-10-25       Impact factor: 8.545

9.  A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI Analysis.

Authors:  Mahnaz Maddah; Lilla Zöllei; W Eric L Grimson; Carl-Fredrik Westin; William M Wells
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2008

10.  Resting state fMRI-guided fiber clustering: methods and applications.

Authors:  Bao Ge; Lei Guo; Tuo Zhang; Xintao Hu; Junwei Han; Tianming Liu
Journal:  Neuroinformatics       Date:  2013-01
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