Literature DB >> 17946126

A kernel-based approach for user-guided fiber bundling using diffusion tensor data.

Raúl San José Estépar1, Marek Kubicki, Martha Shenton, Carl-Fredrik Westin.   

Abstract

This paper describes a novel user-guided method for grouping fibers from diffusion tensor MRI tractography into bundles. The method finds fibers, that passing through user-defined ROIs, still fit to the underlying data model given by the diffusion tensor. This is achieved by filtering the data and the ROIs with a kernel derived from a geodesic metric between tensors. A standard approach using binary decisions defining tracts passing through ROIs is critically dependent on ROIs that includes all trace lines of interest. The method described in this paper uses a softer decision mechanism through a kernel which enables grouping of bundles driven less exact, or even single point, ROIs. The method analyzes the responses obtained from the convolution with a kernel function along the fiber with the ROI data. Results in real data shows the feasibility of the approach to fiber bundling.

Mesh:

Year:  2006        PMID: 17946126      PMCID: PMC2768065          DOI: 10.1109/IEMBS.2006.259829

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  8 in total

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Authors:  S Mori; B J Crain; V P Chacko; P C van Zijl
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6.  Clustering Fiber Traces Using Normalized Cuts.

Authors:  Anders Brun; Hans Knutsson; Hae-Jeong Park; Martha E Shenton; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2004-09-02

7.  Validation of diffusion tensor magnetic resonance axonal fiber imaging with registered manganese-enhanced optic tracts.

Authors:  C P Lin; W Y Tseng; H C Cheng; J H Chen
Journal:  Neuroimage       Date:  2001-11       Impact factor: 6.556

8.  Imaging cortical association tracts in the human brain using diffusion-tensor-based axonal tracking.

Authors:  Susumu Mori; Walter E Kaufmann; Christos Davatzikos; Bram Stieltjes; Laura Amodei; Kim Fredericksen; Godfrey D Pearlson; Elias R Melhem; Meiyappan Solaiyappan; Gerald V Raymond; Hugo W Moser; Peter C M van Zijl
Journal:  Magn Reson Med       Date:  2002-02       Impact factor: 4.668

  8 in total
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2.  Diffusion tensor tractography analysis of the corpus callosum fibers in amyotrophic lateral sclerosis.

Authors:  Jee-Eun Kim; Jungsu S Oh; Jung-Joon Sung; Kwang-Woo Lee; In Chan Song; Yoon-Ho Hong
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3.  Diffusion tractography of the fornix in schizophrenia.

Authors:  J Fitzsimmons; M Kubicki; K Smith; G Bushell; R San Jose Estepar; C-F Westin; P G Nestor; M A Niznikiewicz; R Kikinis; R W McCarley; M E Shenton
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  3 in total

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