Literature DB >> 19858200

High speed atomic force microscopy visualizes processive movement of Trichoderma reesei cellobiohydrolase I on crystalline cellulose.

Kiyohiko Igarashi1, Anu Koivula2, Masahisa Wada3, Satoshi Kimura3, Merja Penttilä2, Masahiro Samejima3.   

Abstract

Fungal cellobiohydrolases act at liquid-solid interfaces. They have the ability to hydrolyze cellulose chains of a crystalline substrate because of their two-domain structure, i.e. cellulose-binding domain and catalytic domain, and unique active site architecture. However, the details of the action of the two domains on crystalline cellulose are still unclear. Here, we present real time observations of Trichoderma reesei (Tr) cellobiohydrolase I (Cel7A) molecules sliding on crystalline cellulose, obtained with a high speed atomic force microscope. The average velocity of the sliding movement on crystalline cellulose was 3.5 nm/s, and interestingly, the catalytic domain without the cellulose-binding domain moved with a velocity similar to that of the intact TrCel7A enzyme. However, no sliding of a catalytically inactive enzyme (mutant E212Q) or a variant lacking tryptophan at the entrance of the active site tunnel (mutant W40A) could be detected. This indicates that, besides the hydrolysis of glycosidic bonds, the loading of a cellulose chain into the active site tunnel is also essential for the enzyme movement.

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Year:  2009        PMID: 19858200      PMCID: PMC2794734          DOI: 10.1074/jbc.M109.034611

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  The mechanism of cellulase action on cotton fibers: evidence from atomic force microscopy.

Authors:  I Lee; B R Evans; J Woodward
Journal:  Ultramicroscopy       Date:  2000-02       Impact factor: 2.689

2.  The binding specificity and affinity determinants of family 1 and family 3 cellulose binding modules.

Authors:  Janne Lehtiö; Junji Sugiyama; Malin Gustavsson; Linda Fransson; Markus Linder; Tuula T Teeri
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-09       Impact factor: 11.205

3.  Atomic force microscope.

Authors: 
Journal:  Phys Rev Lett       Date:  1986-03-03       Impact factor: 9.161

4.  Structural changes in cellobiohydrolase I upon binding of a macromolecular ligand as evident by SAXS investigations.

Authors:  P M Abuja; I Pilz; P Tomme; M Claeyssens
Journal:  Biochem Biophys Res Commun       Date:  1989-12-15       Impact factor: 3.575

5.  Role of the interdomain linker peptide of Trichoderma reesei cellobiohydrolase I in its interaction with crystalline cellulose.

Authors:  M Srisodsuk; T Reinikainen; M Penttilä; T T Teeri
Journal:  J Biol Chem       Date:  1993-10-05       Impact factor: 5.157

6.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

7.  Meaning of energetic parameters.

Authors:  H Kammermeier
Journal:  Basic Res Cardiol       Date:  1993 Sep-Oct       Impact factor: 17.165

8.  The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei.

Authors:  C Divne; J Ståhlberg; T Reinikainen; L Ruohonen; G Pettersson; J K Knowles; T T Teeri; T A Jones
Journal:  Science       Date:  1994-07-22       Impact factor: 47.728

9.  Characterization of an endoglucanase belonging to a new subfamily of glycoside hydrolase family 45 of the basidiomycete Phanerochaete chrysosporium.

Authors:  Kiyohiko Igarashi; Takuya Ishida; Chiaki Hori; Masahiro Samejima
Journal:  Appl Environ Microbiol       Date:  2008-08-01       Impact factor: 4.792

10.  Processive action of cellobiohydrolase Cel7A from Trichoderma reesei is revealed as 'burst' kinetics on fluorescent polymeric model substrates.

Authors:  Kalle Kipper; Priit Väljamäe; Gunnar Johansson
Journal:  Biochem J       Date:  2005-01-15       Impact factor: 3.857

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  63 in total

1.  Computational investigation of glycosylation effects on a family 1 carbohydrate-binding module.

Authors:  Courtney B Taylor; M Faiz Talib; Clare McCabe; Lintao Bu; William S Adney; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  J Biol Chem       Date:  2011-12-06       Impact factor: 5.157

2.  Pre-steady-state kinetics for hydrolysis of insoluble cellulose by cellobiohydrolase Cel7A.

Authors:  Nicolaj Cruys-Bagger; Jens Elmerdahl; Eigil Praestgaard; Hirosuke Tatsumi; Nikolaj Spodsberg; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2012-04-09       Impact factor: 5.157

3.  Role of supramolecular cellulose structures in enzymatic hydrolysis of plant cell walls.

Authors:  Lisbeth Garbrecht Thygesen; Budi Juliman Hidayat; Katja Salomon Johansen; Claus Felby
Journal:  J Ind Microbiol Biotechnol       Date:  2010-09-18       Impact factor: 3.346

Review 4.  The biochemistry and structural biology of plant cell wall deconstruction.

Authors:  Harry J Gilbert
Journal:  Plant Physiol       Date:  2010-04-20       Impact factor: 8.340

5.  Processivity of cellobiohydrolases is limited by the substrate.

Authors:  Mihhail Kurasin; Priit Väljamäe
Journal:  J Biol Chem       Date:  2010-11-04       Impact factor: 5.157

6.  Substrate selectivity in starch polysaccharide monooxygenases.

Authors:  Van V Vu; John A Hangasky; Tyler C Detomasi; Skylar J W Henry; Son Tung Ngo; Elise A Span; Michael A Marletta
Journal:  J Biol Chem       Date:  2019-06-24       Impact factor: 5.157

7.  Binding and movement of individual Cel7A cellobiohydrolases on crystalline cellulose surfaces revealed by single-molecule fluorescence imaging.

Authors:  Jaemyeong Jung; Anurag Sethi; Tiziano Gaiotto; Jason J Han; Tina Jeoh; Sandrasegaram Gnanakaran; Peter M Goodwin
Journal:  J Biol Chem       Date:  2013-07-01       Impact factor: 5.157

8.  Glycosylated linkers in multimodular lignocellulose-degrading enzymes dynamically bind to cellulose.

Authors:  Christina M Payne; Michael G Resch; Liqun Chen; Michael F Crowley; Michael E Himmel; Larry E Taylor; Mats Sandgren; Jerry Ståhlberg; Ingeborg Stals; Zhongping Tan; Gregg T Beckham
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

9.  Cellulase processivity.

Authors:  David B Wilson; Maxim Kostylev
Journal:  Methods Mol Biol       Date:  2012

10.  The tryptophan residue at the active site tunnel entrance of Trichoderma reesei cellobiohydrolase Cel7A is important for initiation of degradation of crystalline cellulose.

Authors:  Akihiko Nakamura; Takeshi Tsukada; Sanna Auer; Tadaomi Furuta; Masahisa Wada; Anu Koivula; Kiyohiko Igarashi; Masahiro Samejima
Journal:  J Biol Chem       Date:  2013-03-26       Impact factor: 5.157

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