Literature DB >> 15362979

Processive action of cellobiohydrolase Cel7A from Trichoderma reesei is revealed as 'burst' kinetics on fluorescent polymeric model substrates.

Kalle Kipper1, Priit Väljamäe, Gunnar Johansson.   

Abstract

Reaction conditions for the reducing-end-specific derivatization of cellulose substrates with the fluorogenic compound, anthranilic acid, have been established. Hydrolysis of fluorescence-labelled celluloses by cellobiohydrolase Cel7A from Trichoderma reesei was consistent with the active-site titration kinetics (burst kinetics), which allowed the quantification of the processivity of the enzyme. The processivity values of 88+/-10, 42+/-10 and 34+/-2.0 cellobiose units were found for Cel7A acting on labelled bacterial cellulose, bacterial microcrystalline cellulose and endoglucanase-pretreated bacterial cellulose respectively. The anthranilic acid derivatization also provides an alternative means for estimating the average degree of polymerization of cellulose and, furthermore, allows the quantitative monitoring of the production of reducing end groups on solid cellulose on hydrolysis by cellulases. Hydrolysis of bacterial cellulose by cellulases from T. reesei revealed that, by contrast with endoglucanase Cel5A, neither cellobiohydrolases Cel7A nor Cel6A produced detectable amounts of new reducing end groups on residual cellulose.

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Year:  2005        PMID: 15362979      PMCID: PMC1134725          DOI: 10.1042/BJ20041144

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  27 in total

1.  Mechanism of substrate inhibition in cellulose synergistic degradation.

Authors:  P Väljamäe; G Pettersson; G Johansson
Journal:  Eur J Biochem       Date:  2001-08

Review 2.  A structural basis for processivity.

Authors:  W A Breyer; B W Matthews
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

3.  Notes on sugar determination.

Authors:  M SMOGYI
Journal:  J Biol Chem       Date:  1952-03       Impact factor: 5.157

4.  Optimization of derivatization with 2-aminobenzoic acid for determination of monosaccharide composition by capillary electrophoresis.

Authors:  K Sato; K Sato; A Okuba; S Yamazaki
Journal:  Anal Biochem       Date:  1998-09-10       Impact factor: 3.365

5.  Imaging the enzymatic digestion of bacterial cellulose ribbons reveals the endo character of the cellobiohydrolase Cel6A from Humicola insolens and its mode of synergy with cellobiohydrolase Cel7A.

Authors:  C Boisset; C Fraschini; M Schülein; B Henrissat; H Chanzy
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

6.  Crystallographic evidence for substrate ring distortion and protein conformational changes during catalysis in cellobiohydrolase Ce16A from trichoderma reesei.

Authors:  J y Zou; G J Kleywegt; J Ståhlberg; H Driguez; W Nerinckx; M Claeyssens; A Koivula; T T Teeri; T A Jones
Journal:  Structure       Date:  1999-09-15       Impact factor: 5.006

7.  Acid hydrolysis of bacterial cellulose reveals different modes of synergistic action between cellobiohydrolase I and endoglucanase I.

Authors:  P Väljamäe; V Sild; A Nutt; G Pettersson; G Johansson
Journal:  Eur J Biochem       Date:  1999-12

8.  The use of the 2-aminobenzoic acid tag for oligosaccharide gel electrophoresis.

Authors:  Z Huang; T Prickett; M Potts; R F Helm
Journal:  Carbohydr Res       Date:  2000-08-18       Impact factor: 2.104

9.  Engineering of a glycosidase Family 7 cellobiohydrolase to more alkaline pH optimum: the pH behaviour of Trichoderma reesei Cel7A and its E223S/ A224H/L225V/T226A/D262G mutant.

Authors:  D Becker; C Braet; H Brumer ; M Claeyssens; C Divne; B R Fagerström; M Harris; T A Jones; G J Kleywegt; A Koivula; S Mahdi; K Piens; M L Sinnott; J Ståhlberg; T T Teeri; M Underwood; G Wohlfahrt
Journal:  Biochem J       Date:  2001-05-15       Impact factor: 3.857

10.  Progress curves--a mean for functional classification of cellulases.

Authors:  A Nutt; V Sild; G Pettersson; G Johansson
Journal:  Eur J Biochem       Date:  1998-11-15
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  25 in total

1.  Processivity of cellobiohydrolases is limited by the substrate.

Authors:  Mihhail Kurasin; Priit Väljamäe
Journal:  J Biol Chem       Date:  2010-11-04       Impact factor: 5.157

2.  Slow Off-rates and Strong Product Binding Are Required for Processivity and Efficient Degradation of Recalcitrant Chitin by Family 18 Chitinases.

Authors:  Mihhail Kurašin; Silja Kuusk; Piret Kuusk; Morten Sørlie; Priit Väljamäe
Journal:  J Biol Chem       Date:  2015-10-14       Impact factor: 5.157

3.  Endo-exo synergism in cellulose hydrolysis revisited.

Authors:  Jürgen Jalak; Mihhail Kurašin; Hele Teugjas; Priit Väljamäe
Journal:  J Biol Chem       Date:  2012-06-25       Impact factor: 5.157

4.  Origin of initial burst in activity for Trichoderma reesei endo-glucanases hydrolyzing insoluble cellulose.

Authors:  Leigh Murphy; Nicolaj Cruys-Bagger; Heidi Delcomyn Damgaard; Martin J Baumann; Søren Nymand Olsen; Kim Borch; Søren Flensted Lassen; Matt Sweeney; Hirosuke Tatsumi; Peter Westh
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

5.  Kinetics of cellobiohydrolase (Cel7A) variants with lowered substrate affinity.

Authors:  Jeppe Kari; Johan Olsen; Kim Borch; Nicolaj Cruys-Bagger; Kenneth Jensen; Peter Westh
Journal:  J Biol Chem       Date:  2014-09-30       Impact factor: 5.157

6.  Comparison of the heterologous expression of Trichoderma reesei endoglucanase II and cellobiohydrolase II in the yeasts Pichia pastoris and Yarrowia lipolytica.

Authors:  Nassapat Boonvitthya; Sophie Bozonnet; Vorakan Burapatana; Michael J O'Donohue; Warawut Chulalaksananukul
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

7.  Cellulase processivity.

Authors:  David B Wilson; Maxim Kostylev
Journal:  Methods Mol Biol       Date:  2012

8.  The tryptophan residue at the active site tunnel entrance of Trichoderma reesei cellobiohydrolase Cel7A is important for initiation of degradation of crystalline cellulose.

Authors:  Akihiko Nakamura; Takeshi Tsukada; Sanna Auer; Tadaomi Furuta; Masahisa Wada; Anu Koivula; Kiyohiko Igarashi; Masahiro Samejima
Journal:  J Biol Chem       Date:  2013-03-26       Impact factor: 5.157

9.  Single-molecule Imaging Analysis of Binding, Processive Movement, and Dissociation of Cellobiohydrolase Trichoderma reesei Cel6A and Its Domains on Crystalline Cellulose.

Authors:  Akihiko Nakamura; Tomoyuki Tasaki; Daiki Ishiwata; Mayuko Yamamoto; Yasuko Okuni; Akasit Visootsat; Morice Maximilien; Hiroyuki Noji; Taku Uchiyama; Masahiro Samejima; Kiyohiko Igarashi; Ryota Iino
Journal:  J Biol Chem       Date:  2016-09-08       Impact factor: 5.157

10.  High speed atomic force microscopy visualizes processive movement of Trichoderma reesei cellobiohydrolase I on crystalline cellulose.

Authors:  Kiyohiko Igarashi; Anu Koivula; Masahisa Wada; Satoshi Kimura; Merja Penttilä; Masahiro Samejima
Journal:  J Biol Chem       Date:  2009-10-26       Impact factor: 5.157

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