Literature DB >> 8352747

New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

B Henrissat1, A Bairoch.   

Abstract

301 glycosyl hydrolases and related enzymes corresponding to 39 EC entries of the I.U.B. classification system have been classified into 35 families on the basis of amino-acid-sequence similarities [Henrissat (1991) Biochem. J. 280, 309-316]. Approximately half of the families were found to be monospecific (containing only one EC number), whereas the other half were found to be polyspecific (containing at least two EC numbers). A > 60% increase in sequence data for glycosyl hydrolases (181 additional enzymes or enzyme domains sequences have since become available) allowed us to update the classification not only by the addition of more members to already identified families, but also by the finding of ten new families. On the basis of a comparison of 482 sequences corresponding to 52 EC entries, 45 families, out of which 22 are polyspecific, can now be defined. This classification has been implemented in the SWISS-PROT protein sequence data bank.

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Year:  1993        PMID: 8352747      PMCID: PMC1134435          DOI: 10.1042/bj2930781

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  71 in total

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4.  PROSITE: a dictionary of sites and patterns in proteins.

Authors:  A Bairoch
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

5.  Three-dimensional structure of cellobiohydrolase II from Trichoderma reesei.

Authors:  J Rouvinen; T Bergfors; T Teeri; J K Knowles; T A Jones
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6.  Cellulase families revealed by hydrophobic cluster analysis.

Authors:  B Henrissat; M Claeyssens; P Tomme; L Lemesle; J P Mornon
Journal:  Gene       Date:  1989-09-01       Impact factor: 3.688

7.  DNA sequences of three beta-1,4-endoglucanase genes from Thermomonospora fusca.

Authors:  G Lao; G S Ghangas; E D Jung; D B Wilson
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

8.  Sequence of the Kluyveromyces lactis beta-galactosidase: comparison with prokaryotic enzymes and secondary structure analysis.

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Journal:  Gene       Date:  1992-09-01       Impact factor: 3.688

9.  Nucleotide sequence of the Clostridium thermocellum laminarinase gene.

Authors:  V V Zverlov; D A Laptev; V I Tishkov; G A Velikodvorskaja
Journal:  Biochem Biophys Res Commun       Date:  1991-12-16       Impact factor: 3.575

10.  Nucleotide sequence of the gene for an alkaline endoglucanase from an alkalophilic Bacillus and its expression in Escherichia coli and Bacillus subtilis.

Authors:  N Sumitomo; K Ozaki; S Kawai; S Ito
Journal:  Biosci Biotechnol Biochem       Date:  1992-06       Impact factor: 2.043

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  409 in total

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8.  Differential expression of cell-wall-related genes during the formation of tracheary elements in the Zinnia mesophyll cell system.

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9.  Molecular and biochemical analysis of two beta-galactosidases from Bifidobacterium infantis HL96.

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10.  Identification and characterization of a chitinase antigen from Pseudomonas aeruginosa strain 385.

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Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

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