Literature DB >> 23818525

Binding and movement of individual Cel7A cellobiohydrolases on crystalline cellulose surfaces revealed by single-molecule fluorescence imaging.

Jaemyeong Jung1, Anurag Sethi, Tiziano Gaiotto, Jason J Han, Tina Jeoh, Sandrasegaram Gnanakaran, Peter M Goodwin.   

Abstract

The efficient catalytic conversion of biomass to bioenergy would meet a large portion of energy requirements in the near future. A crucial step in this process is the enzyme-catalyzed hydrolysis of cellulose to glucose that is then converted into fuel such as ethanol by fermentation. Here we use single-molecule fluorescence imaging to directly monitor the movement of individual Cel7A cellobiohydrolases from Trichoderma reesei (TrCel7A) on the surface of insoluble cellulose fibrils to elucidate molecular level details of cellulase activity. The motion of multiple, individual TrCel7A cellobiohydrolases was simultaneously recorded with ∼15-nm spatial resolution. Time-resolved localization microscopy provides insights on the activity of TrCel7A on cellulose and informs on nonproductive binding and diffusion. We measured single-molecule residency time distributions of TrCel7A bound to cellulose both in the presence of and absence of cellobiose the major product and a potent inhibitor of Cel7A activity. Combining these results with a kinetic model of TrCel7A binding provides microscopic insight into interactions between TrCel7A and the cellulose substrate.

Entities:  

Keywords:  Bioenergy; Biofuel; Cellulase; Cellulose; Fluorescence; Molecular Imaging; Single Molecule

Mesh:

Substances:

Year:  2013        PMID: 23818525      PMCID: PMC3745362          DOI: 10.1074/jbc.M113.455758

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  28 in total

1.  Precise nanometer localization analysis for individual fluorescent probes.

Authors:  Russell E Thompson; Daniel R Larson; Watt W Webb
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

2.  The binding specificity and affinity determinants of family 1 and family 3 cellulose binding modules.

Authors:  Janne Lehtiö; Junji Sugiyama; Malin Gustavsson; Linda Fransson; Markus Linder; Tuula T Teeri
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-09       Impact factor: 11.205

3.  Assay of reducing end-groups in oligosaccharide homologues with 2,2'-bicinchoninate.

Authors:  L W Doner; P L Irwin
Journal:  Anal Biochem       Date:  1992-04       Impact factor: 3.365

Review 4.  Microbial cellulose utilization: fundamentals and biotechnology.

Authors:  Lee R Lynd; Paul J Weimer; Willem H van Zyl; Isak S Pretorius
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

5.  Inhibition of the Trichoderma reesei cellulases by cellobiose is strongly dependent on the nature of the substrate.

Authors:  Marju Gruno; Priit Väljamäe; Göran Pettersson; Gunnar Johansson
Journal:  Biotechnol Bioeng       Date:  2004-06-05       Impact factor: 4.530

6.  Studies of the cellulolytic system of Trichoderma reesei QM 9414. Analysis of domain function in two cellobiohydrolases by limited proteolysis.

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Journal:  Eur J Biochem       Date:  1988-01-04

7.  Adsorption characteristics of fungal family 1 cellulose-binding domain from Trichoderma reesei cellobiohydrolase I on crystalline cellulose: negative cooperative adsorption via a steric exclusion effect.

Authors:  Naohisa Sugimoto; Kiyohiko Igarashi; Masahisa Wada; Masahiro Samejima
Journal:  Langmuir       Date:  2012-09-24       Impact factor: 3.882

8.  Continuous photometric determination of endo-1,4-beta-D-glucanase (cellulase) activity using 4-methylumbelliferyl-beta-D-cellobioside as a substrate.

Authors:  V M Chernoglazov; A N Jafarova; A A Klyosov
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

9.  The relationship between thermal stability and pH optimum studied with wild-type and mutant Trichoderma reesei cellobiohydrolase Cel7A.

Authors:  Harry Boer; Anu Koivula
Journal:  Eur J Biochem       Date:  2003-03

10.  Fluorescent cellulose microfibrils as substrate for the detection of cellulase activity.

Authors:  William Helbert; Henri Chanzy; Tommy Lykke Husum; Martin Schülein; Steffen Ernst
Journal:  Biomacromolecules       Date:  2003 May-Jun       Impact factor: 6.988

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  13 in total

1.  Slow Off-rates and Strong Product Binding Are Required for Processivity and Efficient Degradation of Recalcitrant Chitin by Family 18 Chitinases.

Authors:  Mihhail Kurašin; Silja Kuusk; Piret Kuusk; Morten Sørlie; Priit Väljamäe
Journal:  J Biol Chem       Date:  2015-10-14       Impact factor: 5.157

2.  Substrate binding in the processive cellulase Cel7A: Transition state of complexation and roles of conserved tryptophan residues.

Authors:  Nanna Røjel; Jeppe Kari; Trine Holst Sørensen; Silke F Badino; J Preben Morth; Kay Schaller; Ana Mafalda Cavaleiro; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2019-12-17       Impact factor: 5.157

3.  Inter-domain Synergism Is Required for Efficient Feeding of Cellulose Chain into Active Site of Cellobiohydrolase Cel7A.

Authors:  Riin Kont; Jeppe Kari; Kim Borch; Peter Westh; Priit Väljamäe
Journal:  J Biol Chem       Date:  2016-10-25       Impact factor: 5.157

4.  Probing substrate interactions in the active tunnel of a catalytically deficient cellobiohydrolase (Cel7).

Authors:  Francieli Colussi; Trine H Sørensen; Kadri Alasepp; Jeppe Kari; Nicolaj Cruys-Bagger; Michael S Windahl; Johan P Olsen; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

5.  The predominant molecular state of bound enzyme determines the strength and type of product inhibition in the hydrolysis of recalcitrant polysaccharides by processive enzymes.

Authors:  Silja Kuusk; Morten Sørlie; Priit Väljamäe
Journal:  J Biol Chem       Date:  2015-03-12       Impact factor: 5.157

6.  Single-molecule Imaging Analysis of Binding, Processive Movement, and Dissociation of Cellobiohydrolase Trichoderma reesei Cel6A and Its Domains on Crystalline Cellulose.

Authors:  Akihiko Nakamura; Tomoyuki Tasaki; Daiki Ishiwata; Mayuko Yamamoto; Yasuko Okuni; Akasit Visootsat; Morice Maximilien; Hiroyuki Noji; Taku Uchiyama; Masahiro Samejima; Kiyohiko Igarashi; Ryota Iino
Journal:  J Biol Chem       Date:  2016-09-08       Impact factor: 5.157

7.  Cellular automata modeling depicts degradation of cellulosic material by a cellulase system with single-molecule resolution.

Authors:  Manuel Eibinger; Thomas Zahel; Thomas Ganner; Harald Plank; Bernd Nidetzky
Journal:  Biotechnol Biofuels       Date:  2016-03-08       Impact factor: 6.040

8.  Visualising recalcitrance by colocalisation of cellulase, lignin and cellulose in pretreated pine biomass using fluorescence microscopy.

Authors:  Lloyd Donaldson; Alankar Vaidya
Journal:  Sci Rep       Date:  2017-03-10       Impact factor: 4.379

9.  Stimulation and inhibition of enzymatic hydrolysis by organosolv lignins as determined by zeta potential and hydrophobicity.

Authors:  Yang Huang; Shaolong Sun; Chen Huang; Qiang Yong; Thomas Elder; Maobing Tu
Journal:  Biotechnol Biofuels       Date:  2017-06-24       Impact factor: 6.040

10.  Cellobiohydrolase 1 from Trichoderma reesei degrades cellulose in single cellobiose steps.

Authors:  Sonia K Brady; Sarangapani Sreelatha; Yinnian Feng; Shishir P S Chundawat; Matthew J Lang
Journal:  Nat Commun       Date:  2015-12-10       Impact factor: 14.919

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