Literature DB >> 18782766

Triggering protein folding within the GroEL-GroES complex.

Damian Madan1, Zong Lin, Hays S Rye.   

Abstract

The folding of many proteins depends on the assistance of chaperonins like GroEL and GroES and involves the enclosure of substrate proteins inside an internal cavity that is formed when GroES binds to GroEL in the presence of ATP. Precisely how assembly of the GroEL-GroES complex leads to substrate protein encapsulation and folding remains poorly understood. Here we use a chemically modified mutant of GroEL (EL43Py) to uncouple substrate protein encapsulation from release and folding. Although EL43Py correctly initiates a substrate protein encapsulation reaction, this mutant stalls in an intermediate allosteric state of the GroEL ring, which is essential for both GroES binding and the forced unfolding of the substrate protein. This intermediate conformation of the GroEL ring possesses simultaneously high affinity for both GroES and non-native substrate protein, thus preventing escape of the substrate protein while GroES binding and substrate protein compaction takes place. Strikingly, assembly of the folding-active GroEL-GroES complex appears to involve a strategic delay in ATP hydrolysis that is coupled to disassembly of the old, ADP-bound GroEL-GroES complex on the opposite ring.

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Year:  2008        PMID: 18782766      PMCID: PMC2581556          DOI: 10.1074/jbc.M802898200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  46 in total

1.  The chaperonin ATPase cycle: mechanism of allosteric switching and movements of substrate-binding domains in GroEL.

Authors:  A M Roseman; S Chen; H White; K Braig; H R Saibil
Journal:  Cell       Date:  1996-10-18       Impact factor: 41.582

2.  Solution structures of GroEL and its complex with rhodanese from small-angle neutron scattering.

Authors:  P Thiyagarajan; S J Henderson; A Joachimiak
Journal:  Structure       Date:  1996-01-15       Impact factor: 5.006

3.  Asymmetry, commitment and inhibition in the GroE ATPase cycle impose alternating functions on the two GroEL rings.

Authors:  N M Kad; N A Ranson; M J Cliff; A R Clarke
Journal:  J Mol Biol       Date:  1998-04-24       Impact factor: 5.469

4.  How GroES regulates binding of nonnative protein to GroEL.

Authors:  H Sparrer; J Buchner
Journal:  J Biol Chem       Date:  1997-05-30       Impact factor: 5.157

5.  The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex.

Authors:  Z Xu; A L Horwich; P B Sigler
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

6.  Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL.

Authors:  H S Rye; S G Burston; W A Fenton; J M Beechem; Z Xu; P B Sigler; A L Horwich
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

7.  Protein folding in the central cavity of the GroEL-GroES chaperonin complex.

Authors:  M Mayhew; A C da Silva; J Martin; H Erdjument-Bromage; P Tempst; F U Hartl
Journal:  Nature       Date:  1996-02-01       Impact factor: 49.962

8.  GroEL locked in a closed conformation by an interdomain cross-link can bind ATP and polypeptide but cannot process further reaction steps.

Authors:  N Murai; Y Makino; M Yoshida
Journal:  J Biol Chem       Date:  1996-11-08       Impact factor: 5.157

9.  GroEL-GroES cycling: ATP and nonnative polypeptide direct alternation of folding-active rings.

Authors:  H S Rye; A M Roseman; S Chen; K Furtak; W A Fenton; H R Saibil; A L Horwich
Journal:  Cell       Date:  1999-04-30       Impact factor: 41.582

10.  The DNA-unwinding mechanism of the ring helicase of bacteriophage T7.

Authors:  Yong-Joo Jeong; Mikhail K Levin; Smita S Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

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  20 in total

1.  Out-of-equilibrium conformational cycling of GroEL under saturating ATP concentrations.

Authors:  Gabriel A Frank; Mila Goomanovsky; Amit Davidi; Guy Ziv; Amnon Horovitz; Gilad Haran
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

2.  Polypeptide in the chaperonin cage partly protrudes out and then folds inside or escapes outside.

Authors:  Fumihiro Motojima; Masasuke Yoshida
Journal:  EMBO J       Date:  2010-10-19       Impact factor: 11.598

3.  Clathrin coat disassembly by the yeast Hsc70/Ssa1p and auxilin/Swa2p proteins observed by single-particle burst analysis spectroscopy.

Authors:  Kelly C Krantz; Jason Puchalla; Rajan Thapa; Callie Kobayashi; Margaret Bisher; Julie Viehweg; Chavela M Carr; Hays S Rye
Journal:  J Biol Chem       Date:  2013-08-02       Impact factor: 5.157

4.  Repetitive protein unfolding by the trans ring of the GroEL-GroES chaperonin complex stimulates folding.

Authors:  Zong Lin; Jason Puchalla; Daniel Shoup; Hays S Rye
Journal:  J Biol Chem       Date:  2013-09-10       Impact factor: 5.157

5.  Symmetric GroEL:GroES2 complexes are the protein-folding functional form of the chaperonin nanomachine.

Authors:  Dong Yang; Xiang Ye; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

Review 6.  Reconciling theories of chaperonin accelerated folding with experimental evidence.

Authors:  Andrew I Jewett; Joan-Emma Shea
Journal:  Cell Mol Life Sci       Date:  2009-10-23       Impact factor: 9.261

Review 7.  The chaperone toolbox at the single-molecule level: From clamping to confining.

Authors:  Mario J Avellaneda; Eline J Koers; Mohsin M Naqvi; Sander J Tans
Journal:  Protein Sci       Date:  2017-04-20       Impact factor: 6.725

8.  Single-molecule observation of protein folding in symmetric GroEL-(GroES)2 complexes.

Authors:  Yodai Takei; Ryo Iizuka; Taro Ueno; Takashi Funatsu
Journal:  J Biol Chem       Date:  2012-10-09       Impact factor: 5.157

9.  The C-terminal tails of the bacterial chaperonin GroEL stimulate protein folding by directly altering the conformation of a substrate protein.

Authors:  Jeremy Weaver; Hays S Rye
Journal:  J Biol Chem       Date:  2014-06-25       Impact factor: 5.157

10.  Structure of GroEL in complex with an early folding intermediate of alanine glyoxylate aminotransferase.

Authors:  Armando Albert; Cristina Yunta; Rocío Arranz; Alvaro Peña; Eduardo Salido; José María Valpuesta; Jaime Martín-Benito
Journal:  J Biol Chem       Date:  2010-01-07       Impact factor: 5.157

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