Literature DB >> 19851829

Reconciling theories of chaperonin accelerated folding with experimental evidence.

Andrew I Jewett1, Joan-Emma Shea.   

Abstract

For the last 20 years, a large volume of experimental and theoretical work has been undertaken to understand how chaperones like GroEL can assist protein folding in the cell. The most accepted explanation appears to be the simplest: GroEL, like most other chaperones, helps proteins fold by preventing aggregation. However, evidence suggests that, under some conditions, GroEL can play a more active role by accelerating protein folding. A large number of models have been proposed to explain how this could occur. Focused experiments have been designed and carried out using different protein substrates with conclusions that support many different mechanisms. In the current article, we attempt to see the forest through the trees. We review all suggested mechanisms for chaperonin-mediated folding and weigh the plausibility of each in light of what we now know about the most stringent, essential, GroEL-dependent protein substrates.

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Year:  2009        PMID: 19851829     DOI: 10.1007/s00018-009-0164-6

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  192 in total

1.  Thinking outside the box: new insights into the mechanism of GroEL-mediated protein folding.

Authors:  J D Wang; J S Weissman
Journal:  Nat Struct Biol       Date:  1999-07

2.  The ATPase activity of GroEL is supported at high temperatures by divalent cations that stabilize its structure.

Authors:  Girish C Melkani; Gustavo Zardeneta; Jose A Mendoza
Journal:  Biometals       Date:  2003-09       Impact factor: 2.949

Review 3.  Protein folding: importance of the Anfinsen cage.

Authors:  R John Ellis
Journal:  Curr Biol       Date:  2003-11-11       Impact factor: 10.834

4.  GroEL-GroES-mediated protein folding requires an intact central cavity.

Authors:  J D Wang; M D Michelitsch; J S Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

5.  The effect of macromolecular crowding on chaperonin-mediated protein folding.

Authors:  J Martin; F U Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

6.  Influence of the GroE molecular chaperone machine on the in vitro refolding of Escherichia coli beta-galactosidase.

Authors:  A Ayling; F Baneyx
Journal:  Protein Sci       Date:  1996-03       Impact factor: 6.725

7.  Mechanism of GroEL action: productive release of polypeptide from a sequestered position under GroES.

Authors:  J S Weissman; C M Hohl; O Kovalenko; Y Kashi; S Chen; K Braig; H R Saibil; W A Fenton; A L Horwich
Journal:  Cell       Date:  1995-11-17       Impact factor: 41.582

8.  Chaperonins can catalyse the reversal of early aggregation steps when a protein misfolds.

Authors:  N A Ranson; N J Dunster; S G Burston; A R Clarke
Journal:  J Mol Biol       Date:  1995-07-28       Impact factor: 5.469

9.  Folding of maltose-binding protein. Evidence for the identity of the rate-determining step in vivo and in vitro.

Authors:  S Y Chun; S Strobel; P Bassford; L L Randall
Journal:  J Biol Chem       Date:  1993-10-05       Impact factor: 5.157

10.  Protein folding in the central cavity of the GroEL-GroES chaperonin complex.

Authors:  M Mayhew; A C da Silva; J Martin; H Erdjument-Bromage; P Tempst; F U Hartl
Journal:  Nature       Date:  1996-02-01       Impact factor: 49.962

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  21 in total

1.  Extended surfaces modulate hydrophobic interactions of neighboring solutes.

Authors:  Amish J Patel; Patrick Varilly; Sumanth N Jamadagni; Hari Acharya; Shekhar Garde; David Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-10       Impact factor: 11.205

2.  A systematic survey of in vivo obligate chaperonin-dependent substrates.

Authors:  Kei Fujiwara; Yasushi Ishihama; Kenji Nakahigashi; Tomoyoshi Soga; Hideki Taguchi
Journal:  EMBO J       Date:  2010-04-01       Impact factor: 11.598

3.  Single-molecule spectroscopy of protein folding in a chaperonin cage.

Authors:  Hagen Hofmann; Frank Hillger; Shawn H Pfeil; Armin Hoffmann; Daniel Streich; Dominik Haenni; Daniel Nettels; Everett A Lipman; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

4.  Archaeal-like chaperonins in bacteria.

Authors:  Stephen M Techtmann; Frank T Robb
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-05       Impact factor: 11.205

5.  Repetitive protein unfolding by the trans ring of the GroEL-GroES chaperonin complex stimulates folding.

Authors:  Zong Lin; Jason Puchalla; Daniel Shoup; Hays S Rye
Journal:  J Biol Chem       Date:  2013-09-10       Impact factor: 5.157

6.  A sticky cage can slow down folding.

Authors:  Wouter Boomsma; Kresten Lindorff-Larsen
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

7.  The C-terminal tails of the bacterial chaperonin GroEL stimulate protein folding by directly altering the conformation of a substrate protein.

Authors:  Jeremy Weaver; Hays S Rye
Journal:  J Biol Chem       Date:  2014-06-25       Impact factor: 5.157

8.  GroEL/ES chaperonin modulates the mechanism and accelerates the rate of TIM-barrel domain folding.

Authors:  Florian Georgescauld; Kristina Popova; Amit J Gupta; Andreas Bracher; John R Engen; Manajit Hayer-Hartl; F Ulrich Hartl
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

9.  The exclusive effects of chaperonin on the behavior of proteins with 52 knot.

Authors:  Yani Zhao; Pawel Dabrowski-Tumanski; Szymon Niewieczerzal; Joanna I Sulkowska
Journal:  PLoS Comput Biol       Date:  2018-03-16       Impact factor: 4.475

Review 10.  Where soft matter meets living matter--protein structure, stability, and folding in the cell.

Authors:  Margaret S Cheung
Journal:  Curr Opin Struct Biol       Date:  2013-03-07       Impact factor: 6.809

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