Literature DB >> 23048033

Single-molecule observation of protein folding in symmetric GroEL-(GroES)2 complexes.

Yodai Takei1, Ryo Iizuka, Taro Ueno, Takashi Funatsu.   

Abstract

The chaperonin, GroEL, is an essential molecular chaperone that mediates protein folding together with its cofactor, GroES, in Escherichia coli. It is widely believed that the two rings of GroEL alternate between the folding active state coupled to GroES binding during the reaction cycle. In other words, an asymmetric GroEL-GroES complex (the bullet-shaped complex) is formed throughout the cycle, whereas a symmetric GroEL-(GroES)(2) complex (the football-shaped complex) is not formed. We have recently shown that the football-shaped complex coexists with the bullet-shaped complex during the reaction cycle. However, how protein folding proceeds in the football-shaped complex remains poorly understood. Here, we used GFP as a substrate to visualize protein folding in the football-shaped complex by single-molecule fluorescence techniques. We directly showed that GFP folding occurs in both rings of the football-shaped complex. Remarkably, the folding was a sequential two-step reaction, and the kinetics were in excellent agreement with those in the bullet-shaped complex. These results demonstrate that the same reactions take place independently in both rings of the football-shaped complex to facilitate protein folding.

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Year:  2012        PMID: 23048033      PMCID: PMC3510812          DOI: 10.1074/jbc.M112.398628

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  A kinetic analysis of the nucleotide-induced allosteric transitions of GroEL.

Authors:  M J Cliff; N M Kad; N Hay; P A Lund; M R Webb; S G Burston; A R Clarke
Journal:  J Mol Biol       Date:  1999-10-29       Impact factor: 5.469

2.  Single-molecule observation of protein-protein interactions in the chaperonin system.

Authors:  H Taguchi; T Ueno; H Tadakuma; M Yoshida; T Funatsu
Journal:  Nat Biotechnol       Date:  2001-09       Impact factor: 54.908

3.  Watching proteins fold one molecule at a time.

Authors:  Elizabeth Rhoades; Eugene Gussakovsky; Gilad Haran
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-28       Impact factor: 11.205

4.  Discrimination of ATP, ADP, and AMPPNP by chaperonin GroEL: hexokinase treatment revealed the exclusive role of ATP.

Authors:  Fumihiro Motojima; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2003-05-07       Impact factor: 5.157

5.  GroEL mediates protein folding with a two successive timer mechanism.

Authors:  Taro Ueno; Hideki Taguchi; Hisashi Tadakuma; Masasuke Yoshida; Takashi Funatsu
Journal:  Mol Cell       Date:  2004-05-21       Impact factor: 17.970

6.  BeF(x) stops the chaperonin cycle of GroEL-GroES and generates a complex with double folding chambers.

Authors:  Hideki Taguchi; Keigo Tsukuda; Fumihiro Motojima; Ayumi Koike-Takeshita; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2004-08-30       Impact factor: 5.157

7.  Flexibility of GroES mobile loop is required for efficient chaperonin function.

Authors:  Tatsuya Nojima; Takahisa Ikegami; Hideki Taguchi; Masasuke Yoshida
Journal:  J Mol Biol       Date:  2012-05-25       Impact factor: 5.469

8.  Force-generating domain of myosin motor.

Authors:  S Itakura; H Yamakawa; Y Y Toyoshima; A Ishijima; T Kojima; Y Harada; T Yanagida; T Wakabayashi; K Sutoh
Journal:  Biochem Biophys Res Commun       Date:  1993-11-15       Impact factor: 3.575

9.  Hydrophilic residues at the apical domain of GroEL contribute to GroES binding but attenuate polypeptide binding.

Authors:  F Motojima; T Makio; K Aoki; Y Makino; K Kuwajima; M Yoshida
Journal:  Biochem Biophys Res Commun       Date:  2000-01-27       Impact factor: 3.575

10.  Characterization of a functional GroEL14(GroES7)2 chaperonin hetero-oligomer.

Authors:  A Azem; M Kessel; P Goloubinoff
Journal:  Science       Date:  1994-07-29       Impact factor: 47.728

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  12 in total

1.  Symmetric GroEL:GroES2 complexes are the protein-folding functional form of the chaperonin nanomachine.

Authors:  Dong Yang; Xiang Ye; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

2.  Substrate protein switches GroE chaperonins from asymmetric to symmetric cycling by catalyzing nucleotide exchange.

Authors:  Xiang Ye; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

Review 3.  The chaperone toolbox at the single-molecule level: From clamping to confining.

Authors:  Mario J Avellaneda; Eline J Koers; Mohsin M Naqvi; Sander J Tans
Journal:  Protein Sci       Date:  2017-04-20       Impact factor: 6.725

4.  Probing structurally altered and aggregated states of therapeutically relevant proteins using GroEL coupled to bio-layer interferometry.

Authors:  Subhashchandra Naik; Ozan S Kumru; Melissa Cullom; Srivalli N Telikepalli; Elizabeth Lindboe; Taylor L Roop; Sangeeta B Joshi; Divya Amin; Phillip Gao; C Russell Middaugh; David B Volkin; Mark T Fisher
Journal:  Protein Sci       Date:  2014-07-28       Impact factor: 6.725

5.  Formation and structures of GroEL:GroES2 chaperonin footballs, the protein-folding functional form.

Authors:  Xue Fei; Xiang Ye; Nicole A LaRonde; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-18       Impact factor: 11.205

Review 6.  Signalling networks and dynamics of allosteric transitions in bacterial chaperonin GroEL: implications for iterative annealing of misfolded proteins.

Authors:  D Thirumalai; Changbong Hyeon
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

7.  Substrate protein dependence of GroEL-GroES interaction cycle revealed by high-speed atomic force microscopy imaging.

Authors:  Daisuke Noshiro; Toshio Ando
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

Review 8.  Iterative annealing mechanism explains the functions of the GroEL and RNA chaperones.

Authors:  D Thirumalai; George H Lorimer; Changbong Hyeon
Journal:  Protein Sci       Date:  2019-12-23       Impact factor: 6.725

Review 9.  Mechanisms of cellular proteostasis: insights from single-molecule approaches.

Authors:  Carlos J Bustamante; Christian M Kaiser; Rodrigo A Maillard; Daniel H Goldman; Christian A M Wilson
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

Review 10.  ATP-driven molecular chaperone machines.

Authors:  Daniel K Clare; Helen R Saibil
Journal:  Biopolymers       Date:  2013-11       Impact factor: 2.505

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