Literature DB >> 20056599

Structure of GroEL in complex with an early folding intermediate of alanine glyoxylate aminotransferase.

Armando Albert1, Cristina Yunta, Rocío Arranz, Alvaro Peña, Eduardo Salido, José María Valpuesta, Jaime Martín-Benito.   

Abstract

Primary hyperoxaluria type 1 is a rare autosomal recessive disease caused by mutations in the alanine glyoxylate aminotransferase gene (AGXT). We have previously shown that P11L and I340M polymorphisms together with I244T mutation (AGXT-LTM) represent a conformational disease that could be amenable to pharmacological intervention. Thus, the study of the folding mechanism of AGXT is crucial to understand the molecular basis of the disease. Here, we provide biochemical and structural data showing that AGXT-LTM is able to form non-native folding intermediates. The three-dimensional structure of a complex between the bacterial chaperonin GroEL and a folding intermediate of AGXT-LTM mutant has been solved by cryoelectron microscopy. The electron density map shows the protein substrate in a non-native extended conformation that crosses the GroEL central cavity. Addition of ATP to the complex induces conformational changes on the chaperonin and the internalization of the protein substrate into the folding cavity. The structure provides a three-dimensional picture of an in vivo early ATP-dependent step of the folding reaction cycle of the chaperonin and supports a GroEL functional model in which the chaperonin promotes folding of the AGXT-LTM mutant protein through forced unfolding mechanism.

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Year:  2010        PMID: 20056599      PMCID: PMC2825432          DOI: 10.1074/jbc.M109.062471

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Eukaryotic type II chaperonin CCT interacts with actin through specific subunits.

Authors:  O Llorca; E A McCormack; G Hynes; J Grantham; J Cordell; J L Carrascosa; K R Willison; J J Fernandez; J M Valpuesta
Journal:  Nature       Date:  1999-12-09       Impact factor: 49.962

3.  Multi-resolution contour-based fitting of macromolecular structures.

Authors:  Pablo Chacón; Willy Wriggers
Journal:  J Mol Biol       Date:  2002-03-29       Impact factor: 5.469

Review 4.  The chaperonin folding machine.

Authors:  Helen R Saibil; Neil A Ranson
Journal:  Trends Biochem Sci       Date:  2002-12       Impact factor: 13.807

5.  Accurate determination of local defocus and specimen tilt in electron microscopy.

Authors:  Joseph A Mindell; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2003-06       Impact factor: 2.867

Review 6.  Chaperonin-mediated protein folding: fate of substrate polypeptide.

Authors:  Wayne A Fenton; Arthur L Horwich
Journal:  Q Rev Biophys       Date:  2003-05       Impact factor: 5.318

7.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

8.  The 'sequential allosteric ring' mechanism in the eukaryotic chaperonin-assisted folding of actin and tubulin.

Authors:  O Llorca; J Martín-Benito; J Grantham; M Ritco-Vonsovici; K R Willison; J L Carrascosa; J M Valpuesta
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

9.  Primary hyperoxaluria type 1 in the Canary Islands: a conformational disease due to I244T mutation in the P11L-containing alanine:glyoxylate aminotransferase.

Authors:  A Santana; E Salido; A Torres; L J Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-30       Impact factor: 11.205

10.  Crystal structure of alanine:glyoxylate aminotransferase and the relationship between genotype and enzymatic phenotype in primary hyperoxaluria type 1.

Authors:  Xiaoxuan Zhang; S Mark Roe; Yanwen Hou; Mark Bartlam; Zihe Rao; Laurence H Pearl; Christopher J Danpure
Journal:  J Mol Biol       Date:  2003-08-15       Impact factor: 5.469

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  8 in total

1.  GroEL-induced topological dislocation of a substrate protein β-sheet core: a solution EPR spin-spin distance study.

Authors:  Rikard Owenius; Anngelica Jarl; Bengt-Harald Jonsson; Uno Carlsson; Per Hammarström
Journal:  J Chem Biol       Date:  2010-04-11

Review 2.  Protein homeostasis defects of alanine-glyoxylate aminotransferase: new therapeutic strategies in primary hyperoxaluria type I.

Authors:  Angel L Pey; Armando Albert; Eduardo Salido
Journal:  Biomed Res Int       Date:  2013-07-16       Impact factor: 3.411

3.  The role of protein denaturation energetics and molecular chaperones in the aggregation and mistargeting of mutants causing primary hyperoxaluria type I.

Authors:  Noel Mesa-Torres; Israel Fabelo-Rosa; Debora Riverol; Cristina Yunta; Armando Albert; Eduardo Salido; Angel L Pey
Journal:  PLoS One       Date:  2013-08-27       Impact factor: 3.240

4.  Transient conformational remodeling of folding proteins by GroES-individually and in concert with GroEL.

Authors:  Satish Babu Moparthi; Daniel Sjölander; Laila Villebeck; Bengt-Harald Jonsson; Per Hammarström; Uno Carlsson
Journal:  J Chem Biol       Date:  2013-10-05

5.  Molecular recognition of PTS-1 cargo proteins by Pex5p: implications for protein mistargeting in primary hyperoxaluria.

Authors:  Noel Mesa-Torres; Nenad Tomic; Armando Albert; Eduardo Salido; Angel L Pey
Journal:  Biomolecules       Date:  2015-02-13

6.  Structural and functional analysis of the role of the chaperonin CCT in mTOR complex assembly.

Authors:  Jorge Cuéllar; W Grant Ludlam; Nicole C Tensmeyer; Takuma Aoba; Madhura Dhavale; César Santiago; M Teresa Bueno-Carrasco; Michael J Mann; Rebecca L Plimpton; Aman Makaju; Sarah Franklin; Barry M Willardson; José M Valpuesta
Journal:  Nat Commun       Date:  2019-06-28       Impact factor: 14.919

7.  Visualizing chaperone-assisted protein folding.

Authors:  Scott Horowitz; Loïc Salmon; Philipp Koldewey; Logan S Ahlstrom; Raoul Martin; Shu Quan; Pavel V Afonine; Henry van den Bedem; Lili Wang; Qingping Xu; Raymond C Trievel; Charles L Brooks; James C A Bardwell
Journal:  Nat Struct Mol Biol       Date:  2016-05-30       Impact factor: 15.369

Review 8.  Evolutionary Divergent Suppressor Mutations in Conformational Diseases.

Authors:  Noel Mesa-Torres; Isabel Betancor-Fernández; Elisa Oppici; Barbara Cellini; Eduardo Salido; Angel L Pey
Journal:  Genes (Basel)       Date:  2018-07-13       Impact factor: 4.096

  8 in total

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