Literature DB >> 18765924

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of tetrahydrodipicolinate-N-succinyltransferase (Rv1201c) from Mycobacterium tuberculosis.

Linda Schuldt1, Simone Weyand, Georgia Kefala, Manfred S Weiss.   

Abstract

Tetrahydrodipicolinate-N-succinyltransferase from Mycobacterium tuberculosis (DapD, Rv1201c) has been cloned, heterologously expressed in Escherichia coli, purified using standard chromatographic techniques and crystallized in the cubic space group I23 or I2(1)3. Preliminary diffraction data analysis indicates the presence of five molecules per asymmetric unit. Furthermore, the data exhibit icosahedral point-group symmetry. One possible explanation for this is that the enzyme assembles into a 60-mer exhibiting 235 point-group symmetry and crystallizes as such in space group I23. In this case, the combination of crystallographic and noncrystallographic symmetry elements results in an arrangement of the icosahedrons in the cubic crystal with one pentamer in the asymmetric unit. Another explanation is that the packing of the molecules itself mimics icosahedral symmetry. In this case both space groups I23 and I2(1)3 would be possible.

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Year:  2008        PMID: 18765924      PMCID: PMC2531272          DOI: 10.1107/S1744309108026559

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  24 in total

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Authors:  A A Vaguine; J Richelle; S J Wodak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

2.  An analysis of some hypotheses related to the Chingelput bacille Calmette-Guérin trial.

Authors:  D Smith; E Wiegeshaus; V Balasubramanian
Journal:  Clin Infect Dis       Date:  2000-09       Impact factor: 9.079

Review 3.  Inhibitors of lysine biosynthesis as antibacterial agents.

Authors:  Craig A Hutton; Timothy J Southwood; Jennifer J Turner
Journal:  Mini Rev Med Chem       Date:  2003-03       Impact factor: 3.862

4.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

5.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DapC (Rv0858c) from Mycobacterium tuberculosis.

Authors:  Simone Weyand; Georgia Kefala; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-07-25

6.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DapA (Rv2753c) from Mycobacterium tuberculosis.

Authors:  Georgia Kefala; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-10-20

7.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of LysA (Rv1293) from Mycobacterium tuberculosis.

Authors:  Georgia Kefala; L Jeanne Perry; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-07-30

8.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DapB (Rv2773c) from Mycobacterium tuberculosis.

Authors:  Georgia Kefala; Robert Janowski; Santosh Panjikar; Christoph Mueller-Dieckmann; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-06-30

9.  Acyl group specificity at the active site of tetrahydridipicolinate N-succinyltransferase.

Authors:  Todd W Beaman; Kurt W Vogel; Dale G Drueckhammer; John S Blanchard; Steven L Roderick
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

10.  The common aromatic amino acid biosynthesis pathway is essential in Mycobacterium tuberculosis.

Authors:  Tanya Parish; Neil G Stoker
Journal:  Microbiology       Date:  2002-10       Impact factor: 2.777

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  4 in total

1.  The three-dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation.

Authors:  Simone Weyand; Georgia Kefala; Dmitri I Svergun; Manfred S Weiss
Journal:  J Struct Funct Genomics       Date:  2009-06-19

2.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the regulatory domain of aspartokinase (Rv3709c) from Mycobacterium tuberculosis.

Authors:  Linda Schuldt; Ruth Suchowersky; Katharina Veith; Jochen Mueller-Dieckmann; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-02-25

3.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of succinyl-diaminopimelate desuccinylase (Rv1202, DapE) from Mycobacterium tuberculosis.

Authors:  Linda Reinhard; Jochen Mueller-Dieckmann; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-08-31

4.  Optimization of protein buffer cocktails using Thermofluor.

Authors:  Linda Reinhard; Hubert Mayerhofer; Arie Geerlof; Jochen Mueller-Dieckmann; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-31
  4 in total

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