Literature DB >> 18606997

Nonequilibrium generation of information in copolymerization processes.

David Andrieux1, Pierre Gaspard.   

Abstract

We consider general fluctuating copolymerization processes, with or without underlying templates. The dissipation associated with these nonequilibrium processes turns out to be closely related to the information generated. This shows in particular how information acquisition results from the interplay between stored patterns and dynamical evolution in nonequilibrium environments. In addition, we apply these results to the process of DNA replication.

Mesh：

Year:  2008        PMID： 18606997      PMCID： PMC2474480          DOI： 10.1073/pnas.0802049105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  9 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

6.  An extracellular Darwinian experiment with a self-duplicating nucleic acid molecule.

Authors:  D R Mills; R L Peterson; S Spiegelman
Journal:  Proc Natl Acad Sci U S A       Date:  1967-07       Impact factor: 11.205

7.  Dissipation-error tradeoff in proofreading.

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Journal:  Biosystems       Date:  1979-08       Impact factor: 1.973

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Journal:  Naturwissenschaften       Date:  1977-11

Review 9.  Molecular evolution of RNA in vitro.

Authors:  C K Biebricher; W C Gardiner
Journal:  Biophys Chem       Date:  1997-06-30       Impact factor: 2.352
  9 in total
  22 in total

1.  Work and information processing in a solvable model of Maxwell's demon.

Authors:  Dibyendu Mandal; Christopher Jarzynski
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

2.  The thermodynamics of writing a random polymer.

Authors:  Christopher Jarzynski
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-07       Impact factor: 11.205

3.  Design principles for nonequilibrium self-assembly.

Authors:  Michael Nguyen; Suriyanarayanan Vaikuntanathan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-22       Impact factor: 11.205

4.  Kinetics and thermodynamics of living copolymerization processes.

Authors:  Pierre Gaspard
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-11-13       Impact factor: 4.226

Review 5.  An ensemble approach to the evolution of complex systems.

Authors:  Göker Arpağ; Ayşe Erzan
Journal:  J Biosci       Date:  2014-04       Impact factor: 1.826

6.  The thermodynamic efficiency of computations made in cells across the range of life.

Authors:  Christopher P Kempes; David Wolpert; Zachary Cohen; Juan Pérez-Mercader
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-12-28       Impact factor: 4.226

7.  Probing complexity: thermodynamics and computational mechanics approaches to origins studies.

Authors:  Stuart J Bartlett; Patrick Beckett
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

8.  Nonequilibrium correlations in minimal dynamical models of polymer copying.

Authors:  Jenny M Poulton; Pieter Rein Ten Wolde; Thomas E Ouldridge
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-18       Impact factor: 11.205

9.  A strong nonequilibrium bound for sorting of cross-linkers on growing biopolymers.

Authors:  Yuqing Qiu; Michael Nguyen; Glen M Hocky; Aaron R Dinner; Suriyanarayanan Vaikuntanathan
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-21       Impact factor: 11.205

10.  Escalation of polymerization in a thermal gradient.

Authors:  Christof B Mast; Severin Schink; Ulrich Gerland; Dieter Braun
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205
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