Literature DB >> 27698043

Kinetics and thermodynamics of living copolymerization processes.

Pierre Gaspard1.   

Abstract

Theoretical advances are reported on the kinetics and thermodynamics of free and template-directed living copolymerizations. Until recently, the kinetic theory of these processes had only been established in the fully irreversible regime, in which the attachment rates are only considered. However, the entropy production is infinite in this regime and the approach to thermodynamic equilibrium cannot be investigated. For this purpose, the detachment rates should also be included. Inspite of this complication, the kinetics can be exactly solved in the regimes of steady growth and depolymerization. In this way, analytical expressions are obtained for the mean growth velocity, the statistical properties of the copolymer sequences, as well as the thermodynamic entropy production. The results apply to DNA replication, transcription and translation, allowing us to understand important aspects of molecular evolution.This article is part of the themed issue 'Multiscale modelling at the physics-chemistry-biology interface'.
© 2016 The Author(s).

Entities:  

Keywords:  DNA replication; copolymers; kinetic theory of copolymerization; molecular evolution

Mesh:

Substances:

Year:  2016        PMID: 27698043      PMCID: PMC5052731          DOI: 10.1098/rsta.2016.0147

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


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