| Literature DB >> 34518221 |
Yuqing Qiu1,2, Michael Nguyen1,2, Glen M Hocky3, Aaron R Dinner1,2, Suriyanarayanan Vaikuntanathan4,2.
Abstract
Understanding the role of nonequilibrium driving in self-organization is crucial for developing a predictive description of biological systems, yet it is impeded by their complexity. The actin cytoskeleton serves as a paradigm for how equilibrium and nonequilibrium forces combine to give rise to self-organization. Motivated by recent experiments that show that actin filament growth rates can tune the morphology of a growing actin bundle cross-linked by two competing types of actin-binding proteins [S. L. Freedman et al., Proc. Natl. Acad. Sci. U.S.A. 116, 16192-16197 (2019)], we construct a minimal model for such a system and show that the dynamics of a growing actin bundle are subject to a set of thermodynamic constraints that relate its nonequilibrium driving, morphology, and molecular fluxes. The thermodynamic constraints reveal the importance of correlations between these molecular fluxes and offer a route to estimating microscopic driving forces from microscopy experiments.Entities:
Keywords: actin bundling and growth; fluctuation–response relations; microscopic nonequilibrium driving; stochastic thermodynamics
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Year: 2021 PMID: 34518221 PMCID: PMC8463841 DOI: 10.1073/pnas.2102881118
Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN: 0027-8424 Impact factor: 11.205