Literature DB >> 17542620

Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase.

Erik C Ralph1, Jennifer S Hirschi, Mark A Anderson, W Wallace Cleland, Daniel A Singleton, Paul F Fitzpatrick.   

Abstract

The mechanism of N-methyltryptophan oxidase, a flavin-dependent amine oxidase from Escherichia coli, was studied using a combination of kinetic isotope effects and theoretical calculations. The 15(kcat/Km) kinetic isotope effect for sarcosine oxidation is pH-dependent with a limiting value of 0.994-0.995 at high pH. Density functional theory calculations on model systems were used to interpret these isotope effects. The isotope effects are inconsistent with proposed mechanisms involving covalent amine-flavin adducts but cannot by themselves conclusively distinguish between some discrete electron-transfer mechanisms and a direct hydride-transfer mechanism, although the latter mechanism is more consistent with the energetics of the reaction.

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Year:  2007        PMID: 17542620      PMCID: PMC2041825          DOI: 10.1021/bi700482h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

1.  The reaction of trimethylamine dehydrogenase with trimethylamine.

Authors:  M H Jang; J Basran; N S Scrutton; R Hille
Journal:  J Biol Chem       Date:  1999-05-07       Impact factor: 5.157

Review 2.  Chemical aspects of amine oxidation by flavoprotein enzymes.

Authors:  Nigel S Scrutton
Journal:  Nat Prod Rep       Date:  2004-10-20       Impact factor: 13.423

3.  Structure of the sodium borohydride-reduced N-(cyclopropyl)glycine adduct of the flavoenzyme monomeric sarcosine oxidase.

Authors:  Zhi-wei Chen; Gouhua Zhao; Suzana Martinovic; Marilyn Schuman Jorns; F Scott Mathews
Journal:  Biochemistry       Date:  2005-11-29       Impact factor: 3.162

4.  Some model reactions and a general mechanism for flavoenzyme-catalyzed dehydrogenations.

Authors:  L E Brown; G A Hamilton
Journal:  J Am Chem Soc       Date:  1970-12-02       Impact factor: 15.419

5.  Monomeric sarcosine oxidase: structure of a covalently flavinylated amine oxidizing enzyme.

Authors:  P Trickey; M A Wagner; M S Jorns; F S Mathews
Journal:  Structure       Date:  1999-03-15       Impact factor: 5.006

6.  A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.

Authors:  C Binda; A Coda; R Angelini; R Federico; P Ascenzi; A Mattevi
Journal:  Structure       Date:  1999-03-15       Impact factor: 5.006

7.  Quantum-chemical predictions of absolute standard redox potentials of diverse organic molecules and free radicals in acetonitrile.

Authors:  Yao Fu; Lei Liu; Hai-Zhu Yu; Yi-Min Wang; Qing-Xiang Guo
Journal:  J Am Chem Soc       Date:  2005-05-18       Impact factor: 15.419

8.  8-Mercaptoflavins as active site probes of flavoenzymes.

Authors:  V Massey; S Ghisla; E G Moore
Journal:  J Biol Chem       Date:  1979-10-10       Impact factor: 5.157

9.  2-(Iodoethenyl)benzylamines as Potential Probes for Radical Intermediates Formed during Monoamine Oxidase Catalyzed Oxidations.

Authors:  Xueqing Wang; Richard B. Silverman
Journal:  J Org Chem       Date:  1998-10-16       Impact factor: 4.354

10.  The structure of L-amino acid oxidase reveals the substrate trajectory into an enantiomerically conserved active site.

Authors:  P D Pawelek; J Cheah; R Coulombe; P Macheroux; S Ghisla; A Vrielink
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

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  27 in total

1.  Mechanistic and structural analyses of the role of His67 in the yeast polyamine oxidase Fms1.

Authors:  Mariya S Adachi; Alexander B Taylor; P John Hart; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2012-06-05       Impact factor: 3.162

Review 2.  Molecular and mechanistic properties of the membrane-bound mitochondrial monoamine oxidases.

Authors:  Dale E Edmondson; Claudia Binda; Jin Wang; Anup K Upadhyay; Andrea Mattevi
Journal:  Biochemistry       Date:  2009-05-26       Impact factor: 3.162

3.  Microbial community degradation of widely used quaternary ammonium disinfectants.

Authors:  Seungdae Oh; Zohre Kurt; Despina Tsementzi; Michael R Weigand; Minjae Kim; Janet K Hatt; Madan Tandukar; Spyros G Pavlostathis; Jim C Spain; Konstantinos T Konstantinidis
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

4.  Computational investigation on the structure-activity relationship of the biradical mechanism for monoamine oxidase.

Authors:  Safiye S Erdem; Burcu Büyükmenekşe
Journal:  J Neural Transm (Vienna)       Date:  2011-04-08       Impact factor: 3.575

5.  Experimental evidence for a hydride transfer mechanism in plant glycolate oxidase catalysis.

Authors:  Younès Dellero; Caroline Mauve; Edouard Boex-Fontvieille; Valérie Flesch; Mathieu Jossier; Guillaume Tcherkez; Michael Hodges
Journal:  J Biol Chem       Date:  2014-11-21       Impact factor: 5.157

6.  13C kinetic isotope effects on the reaction of a flavin amine oxidase determined from whole molecule isotope effects.

Authors:  José R Tormos; Marina B Suarez; Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2016-11-01       Impact factor: 4.013

7.  Isotope effects suggest a stepwise mechanism for berberine bridge enzyme.

Authors:  Helena M Gaweska; Kenneth M Roberts; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2012-09-06       Impact factor: 3.162

8.  Mechanistic and structural analyses of the roles of Arg409 and Asp402 in the reaction of the flavoprotein nitroalkane oxidase.

Authors:  Paul F Fitzpatrick; Dragana M Bozinovski; Annie Héroux; Patrick G Shaw; Michael P Valley; Allen M Orville
Journal:  Biochemistry       Date:  2007-11-10       Impact factor: 3.162

9.  Mechanistic and structural analyses of the roles of active site residues in yeast polyamine oxidase Fms1: characterization of the N195A and D94N enzymes.

Authors:  Mariya S Adachi; Alexander B Taylor; P John Hart; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2012-10-15       Impact factor: 3.162

10.  Mechanistic studies of human spermine oxidase: kinetic mechanism and pH effects.

Authors:  Mariya S Adachi; Paul R Juarez; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2010-01-19       Impact factor: 3.162

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