Literature DB >> 16300392

Structure of the sodium borohydride-reduced N-(cyclopropyl)glycine adduct of the flavoenzyme monomeric sarcosine oxidase.

Zhi-wei Chen1, Gouhua Zhao, Suzana Martinovic, Marilyn Schuman Jorns, F Scott Mathews.   

Abstract

Monomeric sarcosine oxidase (MSOX) is a flavoprotein that contains covalently bound FAD [8a-(S-cysteinyl)FAD] and catalyzes the oxidation of sarcosine (N-methylglycine) and other secondary amino acids, such as l-proline. Our previous studies showed that N-(cyclopropyl)glycine (CPG) acts as a mechanism-based inactivator of MSOX [Zhao, G., et al. (2000) Biochemistry 39, 14341-14347]. The reaction results in the formation of a modified reduced flavin that can be further reduced and stabilized by treatment with sodium borohydride. The borohydride-reduced CPG-modified enzyme exhibits a mass increase of 63 +/- 2 Da as compared with native MSOX. The crystal structure of the modified enzyme, solved at 1.85 A resolution, shows that FAD is the only site of modification. The modified FAD contains a fused five-membered ring, linking the C(4a) and N(5) atoms of the flavin ring, with an additional oxygen atom bound to the carbon atom attached to N(5) and a tetrahedral carbon atom at flavin C(4) with a hydroxyl group attached to C(4). On the basis of the crystal structure of the borohydride-stabilized adduct, we conclude that the labile CPG-modified flavin is a 4a,5-dihydroflavin derivative with a substituent derived from the cleavage of the cyclopropyl ring in CPG. The results are consistent with CPG-mediated inactivation in a reaction initiated by single electron transfer from the amine function in CPG to FAD in MSOX, followed by collapse of the radical pair to yield a covalently modified 4a,5-dihydroflavin.

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Year:  2005        PMID: 16300392     DOI: 10.1021/bi0515422

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

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Authors:  Erik C Ralph; Jennifer S Hirschi; Mark A Anderson; W Wallace Cleland; Daniel A Singleton; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2007-06-02       Impact factor: 3.162

Review 2.  KDM1 class flavin-dependent protein lysine demethylases.

Authors:  Jonathan M Burg; Jennifer E Link; Brittany S Morgan; Frederick J Heller; Amanda E Hargrove; Dewey G McCafferty
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

Review 3.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

4.  Spectral and kinetic characterization of the michaelis charge transfer complex in monomeric sarcosine oxidase.

Authors:  Gouhua Zhao; Marilyn Schuman Jorns
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

5.  Mechanism-based inhibition of quinone reductase 2 (NQO2): selectivity for NQO2 over NQO1 and structural basis for flavoprotein inhibition.

Authors:  Marine Dufour; Chao Yan; David Siegel; Marie A Colucci; Matthew Jenner; Neil J Oldham; Joe Gomez; Philip Reigan; Yazhuo Li; Cristina I De Matteis; David Ross; Christopher J Moody
Journal:  Chembiochem       Date:  2011-04-19       Impact factor: 3.164

6.  Use of pH and kinetic isotope effects to establish chemistry as rate-limiting in oxidation of a peptide substrate by LSD1.

Authors:  Helena Gaweska; Michelle Henderson Pozzi; Dawn M Z Schmidt; Dewey G McCafferty; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

7.  Insights into the mechanisms of flavoprotein oxidases from kinetic isotope effects.

Authors:  Paul F Fitzpatrick
Journal:  J Labelled Comp Radiopharm       Date:  2007-10       Impact factor: 1.921

Review 8.  Oxidation of amines by flavoproteins.

Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2009-08-03       Impact factor: 4.013

9.  Irreversible inactivation of snake venom l-amino acid oxidase by covalent modification during catalysis of l-propargylglycine.

Authors:  Jyotirmoy Mitra; Debasish Bhattacharyya
Journal:  FEBS Open Bio       Date:  2013-02-04       Impact factor: 2.693

  9 in total

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