Literature DB >> 15884964

Quantum-chemical predictions of absolute standard redox potentials of diverse organic molecules and free radicals in acetonitrile.

Yao Fu1, Lei Liu, Hai-Zhu Yu, Yi-Min Wang, Qing-Xiang Guo.   

Abstract

A calibrated B3LYP/6-311++G(2df,2p)//B3LYP/6-31+G(d) method was found to be able to predict the gas-phase adiabatic ionization potentials of 160 structurally unrelated organic molecules with a precision of 0.14 eV. A PCM solvation model was benchmarked that could predict the pK(a)'s of 15 organic acids in acetonitrile with a precision of 1.0 pK(a) unit. Combining the above two methods, we developed a generally applicable protocol that could successfully predict the standard redox potentials of 270 structurally unrelated organic molecules in acetonitrile. The standard deviation of the predictions was 0.17 V. The study demonstrated that computational electrochemistry could become a powerful tool for the organic chemical community. It also confirmed that the continuum solvation theory could correctly predict the solvation energies of organic radicals. Finally, with the help of the newly developed protocol we were able to establish a scale of standard redox potentials for diverse types of organic free radicals for the first time. Knowledge about these redox potentials should be of great value for understanding the numerous electron-transfer reactions in organic and bioorganic chemistry.

Entities:  

Year:  2005        PMID: 15884964     DOI: 10.1021/ja0421856

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Mechanistic Analysis of Oxidative C-H Cleavages Using Inter- and Intramolecular Kinetic Isotope Effects.

Authors:  Hyung Hoon Jung; Paul E Floreancig
Journal:  Tetrahedron       Date:  2009-12-26       Impact factor: 2.457

2.  Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase.

Authors:  Erik C Ralph; Jennifer S Hirschi; Mark A Anderson; W Wallace Cleland; Daniel A Singleton; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2007-06-02       Impact factor: 3.162

3.  Radical Chlorodifluoromethylation: Providing a Motif for (Hetero)arene Diversification.

Authors:  Rory C McAtee; Joel W Beatty; Christopher C McAtee; Corey R J Stephenson
Journal:  Org Lett       Date:  2018-06-01       Impact factor: 6.005

4.  The redox potential of flavin derivatives as a mediator in biosensors.

Authors:  A H Pakiari; M Salarhaji; T Abdollahi; M Safapour
Journal:  J Mol Model       Date:  2021-02-28       Impact factor: 1.810

5.  Roles of Iron Complexes in Catalytic Radical Alkene Cross-Coupling: A Computational and Mechanistic Study.

Authors:  Dongyoung Kim; S M Wahidur Rahaman; Brandon Q Mercado; Rinaldo Poli; Patrick L Holland
Journal:  J Am Chem Soc       Date:  2019-04-26       Impact factor: 15.419

6.  Combined quantum mechanical and molecular mechanical simulations of one- and two-electron reduction potentials of flavin cofactor in water, medium-chain acyl-CoA dehydrogenase, and cholesterol oxidase.

Authors:  Sudeep Bhattacharyya; Marian T Stankovich; Donald G Truhlar; Jiali Gao
Journal:  J Phys Chem A       Date:  2007-06-14       Impact factor: 2.781

Review 7.  Oxidation of amines by flavoproteins.

Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2009-08-03       Impact factor: 4.013

8.  Benchmarking the DFT methodology for assessing antioxidant-related properties: quercetin and edaravone as case studies.

Authors:  Mario Vincenzo La Rocca; Malvina Rutkowski; Stéphanie Ringeissen; Jérôme Gomar; Marie-Céline Frantz; Saliou Ngom; Carlo Adamo
Journal:  J Mol Model       Date:  2016-09-29       Impact factor: 1.810

9.  Dual Catalytic Decarboxylative Allylations of α-Amino Acids and Their Divergent Mechanisms.

Authors:  Simon B Lang; Kathryn M O'Nele; Justin T Douglas; Jon A Tunge
Journal:  Chemistry       Date:  2015-11-03       Impact factor: 5.236

10.  Properties of Intermediates in the Catalytic Cycle of Oxalate Oxidoreductase and Its Suicide Inactivation by Pyruvate.

Authors:  Elizabeth Pierce; Steven O Mansoorabadi; Mehmet Can; George H Reed; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2017-05-23       Impact factor: 3.162

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