Literature DB >> 27815088

13C kinetic isotope effects on the reaction of a flavin amine oxidase determined from whole molecule isotope effects.

José R Tormos1, Marina B Suarez2, Paul F Fitzpatrick3.   

Abstract

A large number of flavoproteins catalyze the oxidation of amines. Because of the importance of these enzymes in metabolism, their mechanisms have previously been studied using deuterium, nitrogen, and solvent isotope effects. While these results have been valuable for computational studies to distinguish among proposed mechanisms, a measure of the change at the reacting carbon has been lacking. We describe here the measurement of a 13C kinetic isotope effect for a representative amine oxidase, polyamine oxidase. The isotope effect was determined by analysis of the isotopic composition of the unlabeled substrate, N, N'-dibenzyl-1,4-diaminopropane, to obtain a pH-independent value of 1.025. The availability of a 13C isotope effect for flavoprotein-catalyzed amine oxidation provides the first measure of the change in bond order at the carbon involved in this carbon-hydrogen bond cleavage and will be of value to understanding the transition state structure for this class of enzymes.
Copyright © 2016. Published by Elsevier Inc.

Entities:  

Keywords:  Dehydrogenase; Enzyme mechanisms; Flavoprotein; Polyamine oxidase

Mesh:

Substances:

Year:  2016        PMID: 27815088      PMCID: PMC5257176          DOI: 10.1016/j.abb.2016.10.018

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  37 in total

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Authors:  Anthony E Pegg
Journal:  IUBMB Life       Date:  2009-09       Impact factor: 3.885

2.  Mechanistic studies of mouse polyamine oxidase with N1,N12-bisethylspermine as a substrate.

Authors:  Montserrat Royo; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2005-05-10       Impact factor: 3.162

3.  Structures and Mechanism of the Monoamine Oxidase Family.

Authors:  Helena Gaweska; Paul F Fitzpatrick
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4.  Nitrogen kinetic isotope effects for the monoamine oxidase B-catalyzed oxidation of benzylamine and (1,1-(2)H2)benzylamine: nitrogen rehybridization and CH bond cleavage are not concerted.

Authors:  Susanna MacMillar; Dale E Edmondson; Olle Matsson
Journal:  J Am Chem Soc       Date:  2011-07-28       Impact factor: 15.419

5.  MD and QM/MM studies on long-chain L-α-hydroxy acid oxidase: substrate binding features and oxidation mechanism.

Authors:  Yang Cao; Shuang Han; Lushan Yu; Haiyan Qian; Jian-Zhong Chen
Journal:  J Phys Chem B       Date:  2014-05-13       Impact factor: 2.991

6.  Amine oxidation mediated by lysine-specific demethylase 1: quantum mechanics/molecular mechanics insights into mechanism and role of lysine 661.

Authors:  Bora Karasulu; Mahendra Patil; Walter Thiel
Journal:  J Am Chem Soc       Date:  2013-08-29       Impact factor: 15.419

7.  Intrinsic primary, secondary, and solvent kinetic isotope effects on the reductive half-reaction of D-amino acid oxidase: evidence against a concerted mechanism.

Authors:  J M Denu; P F Fitzpatrick
Journal:  Biochemistry       Date:  1994-04-05       Impact factor: 3.162

8.  Variation of transition-state structure as a function of the nucleotide in reactions catalyzed by dehydrogenases. 1. Liver alcohol dehydrogenase with benzyl alcohol and yeast aldehyde dehydrogenase with benzaldehyde.

Authors:  M Scharschmidt; M A Fisher; W W Cleland
Journal:  Biochemistry       Date:  1984-11-06       Impact factor: 3.162

9.  pH dependence of a mammalian polyamine oxidase: insights into substrate specificity and the role of lysine 315.

Authors:  Michelle Henderson Pozzi; Vijay Gawandi; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2009-02-24       Impact factor: 3.162

10.  Characterization of unstable products of flavin- and pterin-dependent enzymes by continuous-flow mass spectrometry.

Authors:  Kenneth M Roberts; José R Tormos; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2014-04-18       Impact factor: 3.162

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