Literature DB >> 16341752

Effects of protein-pheromone complexation on correlated chemical shift modulations.

Chiara Perazzolo1, Julien Wist, Karine Loth, Luisa Poggi, Steve Homans, Geoffrey Bodenhausen.   

Abstract

Major urinary protein (MUP) is a pheromone-carrying protein of the lipocalin family. Previous studies by isothermal titration calorimetry (ITC) show that the affinity of MUP for the pheromone 2-methoxy-3-isobutylpyrazine (IBMP) is mainly driven by enthalpy, with a small unfavourable entropic contribution. Entropic terms can be attributed in part to changes in internal motions of the protein upon binding. Slow internal motions can lead to correlated or anti-correlated modulations of the isotropic chemical shifts of carbonyl C' and amide N nuclei. Correlated chemical shift modulations (CSM/CSM) in MUP have been determined by measuring differences of the transverse relaxation rates of zero- and double-quantum coherences ZQC{C'N} and DQC{C'N}, and by accounting for the effects of correlated fluctuations of dipole-dipole couplings (DD/DD) and chemical shift anisotropies (CSA/CSA). The latter can be predicted from tensor parameters of C' and N nuclei that have been determined in earlier work. The effects of complexation on slow time-scale protein dynamics can be determined by comparing the temperature dependence of the relaxation rates of APO-MUP (i.e., without ligand) and HOLO-MUP (i.e., with IBMP as a ligand).

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Year:  2005        PMID: 16341752     DOI: 10.1007/s10858-005-3355-y

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  15 in total

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5.  Thermodynamics of binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the major urinary protein.

Authors:  Richard J Bingham; John B C Findlay; Shih-Yang Hsieh; Arnout P Kalverda; Alexandra Kjellberg; Chiara Perazzolo; Simon E V Phillips; Kothandaraman Seshadri; Chi H Trinh; W Bruce Turnbull; Geoffrey Bodenhausen; Steve W Homans
Journal:  J Am Chem Soc       Date:  2004-02-18       Impact factor: 15.419

6.  Chemical shift anisotropy tensors of carbonyl, nitrogen, and amide proton nuclei in proteins through cross-correlated relaxation in NMR spectroscopy.

Authors:  Karine Loth; Philippe Pelupessy; Geoffrey Bodenhausen
Journal:  J Am Chem Soc       Date:  2005-04-27       Impact factor: 15.419

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3.  Correlated motions of C'-N and Cα-Cβ pairs in protonated and per-deuterated GB3.

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4.  NMR structure and dynamics of the engineered fluorescein-binding lipocalin FluA reveal rigidification of beta-barrel and variable loops upon enthalpy-driven ligand binding.

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5.  Phosphorylation-induced changes in backbone dynamics of the dematin headpiece C-terminal domain.

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Journal:  J Biomol NMR       Date:  2008-11-22       Impact factor: 2.835

Review 6.  Distance-independent Cross-correlated Relaxation and Isotropic Chemical Shift Modulation in Protein Dynamics Studies.

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Journal:  Chemphyschem       Date:  2018-09-03       Impact factor: 3.520

  6 in total

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