Literature DB >> 11457291

Cross-correlated chemical shift modulation: a signature of slow internal motions in proteins.

D Früh1, J R Tolman, G Bodenhausen, C Zwahlen.   

Abstract

A novel NMR experiment allows one to characterize slow motion in macromolecules. The method exploits the fact that motions, such as rotation about dihedral angles, induce correlated fluctuations of the isotropic chemical shifts of the nuclei in the vicinity. The relaxation of two-spin coherences involving C(alpha) and Cbeta nuclei in proteins provides information about correlated fluctuations of the isotropic chemical shifts of C(alpha) and Cbeta. The difference between the relaxation rates of double- and zero-quantum coherences and is shown to be affected by cross-correlated chemical shift modulation. In ubiquitin, evidence for slow motion is found in loops or near the ends of beta-strands and alpha-helices.

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Year:  2001        PMID: 11457291     DOI: 10.1021/ja003487k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  Similarities between intra- and intermolecular hydrogen bonds in RNA kissing complexes found by means of cross-correlated relaxation.

Authors:  Jens Dittmer; Chul-Hyun Kim; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-07       Impact factor: 2.835

2.  Correlated motions of successive amide N-H bonds in proteins.

Authors:  Philippe Pelupessy; Sapna Ravindranathan; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

3.  Triple quantum decoherence under multiple refocusing: slow correlated chemical shift modulations of C' and N nuclei in proteins.

Authors:  Julien Wist; Dominique Frueh; Joel R Tolman; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2004-03       Impact factor: 2.835

4.  Differential multiple quantum relaxation caused by chemical exchange outside the fast exchange limit.

Authors:  Chunyu Wang; Arthur G Palmer
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

5.  Effects of protein-pheromone complexation on correlated chemical shift modulations.

Authors:  Chiara Perazzolo; Julien Wist; Karine Loth; Luisa Poggi; Steve Homans; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2005-12       Impact factor: 2.835

6.  Molecular crowding inhibits intramolecular breathing motions in proteins.

Authors:  Lee Makowski; Diane J Rodi; Suneeta Mandava; David D L Minh; David B Gore; Robert F Fischetti
Journal:  J Mol Biol       Date:  2007-08-17       Impact factor: 5.469

7.  Correlated dynamics of consecutive residues reveal transient and cooperative unfolding of secondary structure in proteins.

Authors:  Patrik Lundström; Frans A A Mulder; Mikael Akke
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-08       Impact factor: 11.205

8.  Deuteration of nonexchangeable protons on proteins affects their thermal stability, side-chain dynamics, and hydrophobicity.

Authors:  Parker J Nichols; Isaac Falconer; Aaron Griffin; Colin Mant; Robert Hodges; Christopher J McKnight; Beat Vögeli; Liliya Vugmeyster
Journal:  Protein Sci       Date:  2020-05-26       Impact factor: 6.725

9.  Cross-correlated relaxation rates between protein backbone H-X dipolar interactions.

Authors:  Beat Vögeli
Journal:  J Biomol NMR       Date:  2017-03-12       Impact factor: 2.835

10.  Modeling conformational ensembles of slow functional motions in Pin1-WW.

Authors:  Faruck Morcos; Santanu Chatterjee; Christopher L McClendon; Paul R Brenner; Roberto López-Rendón; John Zintsmaster; Maria Ercsey-Ravasz; Christopher R Sweet; Matthew P Jacobson; Jeffrey W Peng; Jesús A Izaguirre
Journal:  PLoS Comput Biol       Date:  2010-12-02       Impact factor: 4.475

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