Literature DB >> 16305243

Role of heme types in heme-copper oxidases: effects of replacing a heme b with a heme o mimic in an engineered heme-copper center in myoglobin.

Ningyan Wang1, Xuan Zhao, Yi Lu.   

Abstract

To address the role of the secondary hydroxyl group of heme a/o in heme-copper oxidases, we incorporated Fe(III)-2,4 (4,2) hydroxyethyl vinyl deuterioporphyrin IX, as a heme o mimic, into the engineered heme-copper center in myoglobin (sperm whale myoglobin L29H/F43H, called Cu(B)Mb). The only difference between the heme b of myoglobin and the heme o mimic is the substitution of one of the vinyl side chains of the former with a hydroxyethyl group of the latter. This substitution resulted in an approximately 4 nm blue shift in the Soret band and approximately 20 mV decrease in the heme reduction potential. In a control experiment, the heme b in Cu(B)Mb was also replaced with a mesoheme, which resulted in an approximately 13 nm blue shift and approximately 30 mV decrease in the heme reduction potential. Kinetic studies of the heme o mimic-substituted Cu(B)Mb showed significantly different reactivity toward copper-dependent oxygen reduction from that of the b-type Cu(B)Mb. In reaction with O2, Cu(B)Mb with a native heme b showed heme oxygenase activity by generating verdoheme in the presence of Cu(I). This heme degradation reaction was slowed by approximately 19-fold in the heme o mimic-substituted Cu(B)Mb (from 0.028 s(-1) to 0.0015 s(-1)), while the mesoheme-substituted Cu(B)Mb shared a similar heme degradation rate with that of Cu(B)Mb (0.023 s(-1)). No correlation was found between the heme reduction potential and its O2 reactivity. These results strongly suggest the critical role of the hydroxyl group of heme o in modulating heme-copper oxidase activity through participation in an extra hydrogen-bonding network.

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Year:  2005        PMID: 16305243     DOI: 10.1021/ja052659g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

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Authors:  Yi Lu
Journal:  Inorg Chem       Date:  2006-12-11       Impact factor: 5.165

2.  A designed functional metalloenzyme that reduces O2 to H2O with over one thousand turnovers.

Authors:  Kyle D Miner; Arnab Mukherjee; Yi-Gui Gao; Eric L Null; Igor D Petrik; Xuan Zhao; Natasha Yeung; Howard Robinson; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2012-04-26       Impact factor: 15.336

Review 3.  Design and engineering of artificial oxygen-activating metalloenzymes.

Authors:  Flavia Nastri; Marco Chino; Ornella Maglio; Ambika Bhagi-Damodaran; Yi Lu; Angela Lombardi
Journal:  Chem Soc Rev       Date:  2016-06-24       Impact factor: 54.564

4.  Direct EPR observation of a tyrosyl radical in a functional oxidase model in myoglobin during both H2O2 and O2 reactions.

Authors:  Yang Yu; Arnab Mukherjee; Mark J Nilges; Parisa Hosseinzadeh; Kyle D Miner; Yi Lu
Journal:  J Am Chem Soc       Date:  2014-01-14       Impact factor: 15.419

5.  Spectroscopic and computational study of a nonheme iron nitrosyl center in a biosynthetic model of nitric oxide reductase.

Authors:  Saumen Chakraborty; Julian Reed; Matthew Ross; Mark J Nilges; Igor D Petrik; Soumya Ghosh; Sharon Hammes-Schiffer; J Timothy Sage; Yong Zhang; Charles E Schulz; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-31       Impact factor: 15.336

6.  Using Biosynthetic Models of Heme-Copper Oxidase and Nitric Oxide Reductase in Myoglobin to Elucidate Structural Features Responsible for Enzymatic Activities.

Authors:  Ambika Bhagi-Damodaran; Igor Petrik; Yi Lu
Journal:  Isr J Chem       Date:  2016-09-16       Impact factor: 3.333

7.  Catalytic reduction of NO to N2O by a designed heme copper center in myoglobin: implications for the role of metal ions.

Authors:  Xuan Zhao; Natasha Yeung; Brandy S Russell; Dewain K Garner; Yi Lu
Journal:  J Am Chem Soc       Date:  2006-05-31       Impact factor: 15.419

8.  Role of copper ion in regulating ligand binding in a myoglobin-based cytochrome C oxidase model.

Authors:  Changyuan Lu; Xuan Zhao; Yi Lu; Denis L Rousseau; Syun-Ru Yeh
Journal:  J Am Chem Soc       Date:  2010-02-10       Impact factor: 15.419

Review 9.  Design of functional metalloproteins.

Authors:  Yi Lu; Natasha Yeung; Nathan Sieracki; Nicholas M Marshall
Journal:  Nature       Date:  2009-08-13       Impact factor: 49.962

Review 10.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

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