Literature DB >> 20070118

Role of copper ion in regulating ligand binding in a myoglobin-based cytochrome C oxidase model.

Changyuan Lu1, Xuan Zhao, Yi Lu, Denis L Rousseau, Syun-Ru Yeh.   

Abstract

Cytochrome c oxidase (CcO), the terminal enzyme in the mitochondrial respiratory chain, catalyzes the four-electron reduction of dioxygen to water in a binuclear center comprised of a high-spin heme (heme a(3)) and a copper atom (Cu(B)) coordinated by three histidine residues. As a minimum model for CcO, a mutant of sperm whale myoglobin, named Cu(B)Mb, has been engineered, in which a copper atom is held in the distal heme pocket by the native E7 histidine and two nonnative histidine residues. In this work, the role of the copper in regulating ligand binding in Cu(B)Mb was investigated. Resonance Raman studies show that the presence of copper in CO-bound Cu(B)Mb leads to a CcO-like distal heme pocket. Stopped-flow data show that, upon the initiation of the CO binding reaction, the ligand first binds to the Cu(+); it subsequently transfers from Cu(+) to Fe(2+) in an intramolecular process, similar to that reported for CcO. The high CO affinity toward Cu(+) and the slow intramolecular CO transfer rate between Cu(+) and Fe(2+) in the Cu(B)Mb/Cu(+) complex are analogous to those in Thermus thermophilus CcO (TtCcO) but distinct from those in bovine CcO (bCcO). Additional kinetic studies show that, upon photolysis of the NO-bound Cu(B)Mb/Cu(+) complex, the photolyzed ligand transiently binds to Cu(+) and subsequently rebinds to Fe(2+), accounting for the 100% geminate recombination yield, similar to that found in TtCcO. The data demonstrate that the Cu(B)Mb/Cu(+) complex reproduces essential structural and kinetic features of CcO and that the complex is more akin to TtCcO than to bCcO.

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Year:  2010        PMID: 20070118      PMCID: PMC3761084          DOI: 10.1021/ja907777f

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  51 in total

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Authors:  Sergey A Siletsky; Ilya Belevich; Audrius Jasaitis; Alexander A Konstantinov; Mårten Wikström; Tewfik Soulimane; Michael I Verkhovsky
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Review 2.  Hemoglobins from Mycobacterium tuberculosis and Campylobacter jejuni: a comparative study with resonance Raman spectroscopy.

Authors:  Changyuan Lu; Tsuyoshi Egawa; Masahiro Mukai; Robert K Poole; Syun-Ru Yeh
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Review 3.  Functional biomimetic models for the active site in the respiratory enzyme cytochrome c oxidase.

Authors:  James P Collman; Richard A Decréau
Journal:  Chem Commun (Camb)       Date:  2008-09-04       Impact factor: 6.222

4.  Accommodation of two diatomic molecules in cytochrome bo: insights into NO reductase activity in terminal oxidases.

Authors:  Takahiro Hayashi; Myat T Lin; Krithika Ganesan; Ying Chen; James A Fee; Robert B Gennis; Pierre Moënne-Loccoz
Journal:  Biochemistry       Date:  2009-02-10       Impact factor: 3.162

Review 5.  Molecular mechanism of proton translocation by cytochrome c oxidase.

Authors:  Ilya Belevich; Michael I Verkhovsky
Journal:  Antioxid Redox Signal       Date:  2008-01       Impact factor: 8.401

6.  Toward a chemical mechanism of proton pumping by the B-type cytochrome c oxidases: application of density functional theory to cytochrome ba3 of Thermus thermophilus.

Authors:  James A Fee; David A Case; Louis Noodleman
Journal:  J Am Chem Soc       Date:  2008-10-17       Impact factor: 15.419

Review 7.  Cytochrome c oxidase: exciting progress and remaining mysteries.

Authors:  Peter Brzezinski; Robert B Gennis
Journal:  J Bioenerg Biomembr       Date:  2008-10-31       Impact factor: 2.945

8.  Ligand migration in the truncated hemoglobin-II from Mycobacterium tuberculosis: the role of G8 tryptophan.

Authors:  Victor Guallar; Changyuan Lu; Kenneth Borrelli; Tsuyoshi Egawa; Syun-Ru Yeh
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9.  Electron and proton transfer in the ba(3) oxidase from Thermus thermophilus.

Authors:  Irina A Smirnova; Dmitry Zaslavsky; James A Fee; Robert B Gennis; Peter Brzezinski
Journal:  J Bioenerg Biomembr       Date:  2008-08-28       Impact factor: 2.945

10.  Structural and functional properties of a single domain hemoglobin from the food-borne pathogen Campylobactor jejuni.

Authors:  Changyuan Lu; Masahiro Mukai; Yu Lin; Guanghui Wu; Robert K Poole; Syun-Ru Yeh
Journal:  J Biol Chem       Date:  2007-07-02       Impact factor: 5.157

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  8 in total

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2.  Biochemical responses of the Protaetia brevitarsis Lewis larvae to subchronic copper exposure.

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3.  Design of Heteronuclear Metalloenzymes.

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Journal:  Methods Enzymol       Date:  2016-07-26       Impact factor: 1.600

4.  Site-specific covalent attachment of heme proteins on self-assembled monolayers.

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5.  Spectroscopic and mutagenesis studies of human PGRMC1.

Authors:  Daniel Kaluka; Dipanwita Batabyal; Bing-Yu Chiang; Thomas L Poulos; Syun-Ru Yeh
Journal:  Biochemistry       Date:  2015-02-23       Impact factor: 3.162

6.  O2 Reduction by Biosynthetic Models of Cytochrome c Oxidase: Insights into Role of Proton Transfer Residues from Perturbed Active Sites Models of CcO.

Authors:  Sohini Mukherjee; Manjistha Mukherjee; Arnab Mukherjee; Ambika Bhagi-Damodaran; Yi Lu; Abhishek Dey
Journal:  ACS Catal       Date:  2018-08-15       Impact factor: 13.700

7.  An engineered heme-copper center in myoglobin: CO migration and binding.

Authors:  Karin Nienhaus; John S Olson; G Ulrich Nienhaus
Journal:  Biochim Biophys Acta       Date:  2013-02-28

Review 8.  Molecular understanding of heteronuclear active sites in heme-copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling.

Authors:  Christopher J Reed; Quan N Lam; Evan N Mirts; Yi Lu
Journal:  Chem Soc Rev       Date:  2021-03-01       Impact factor: 54.564

  8 in total

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