Literature DB >> 24383850

Direct EPR observation of a tyrosyl radical in a functional oxidase model in myoglobin during both H2O2 and O2 reactions.

Yang Yu1, Arnab Mukherjee2, Mark J Nilges3, Parisa Hosseinzadeh4, Kyle D Miner4, Yi Lu1,2,4.   

Abstract

Tyrosine is a conserved redox-active amino acid that plays important roles in heme-copper oxidases (HCO). Despite the widely proposed mechanism that involves a tyrosyl radical, its direct observation under O2 reduction conditions remains elusive. Using a functional oxidase model in myoglobin called F33Y-Cu(B)Mb that contains an engineered tyrosine, we report herein direct observation of a tyrosyl radical during both reactions of H2O2 with oxidized protein and O2 with reduced protein by electron paramagnetic resonance spectroscopy, providing a firm support for the tyrosyl radical in the HCO enzymatic mechanism.

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Year:  2014        PMID: 24383850      PMCID: PMC3955430          DOI: 10.1021/ja4091885

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  43 in total

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Authors:  Ningyan Wang; Xuan Zhao; Yi Lu
Journal:  J Am Chem Soc       Date:  2005-11-30       Impact factor: 15.419

2.  Radical formation in cytochrome c oxidase.

Authors:  Michelle A Yu; Tsuyoshi Egawa; Kyoko Shinzawa-Itoh; Shinya Yoshikawa; Syun-Ru Yeh; Denis L Rousseau; Gary J Gerfen
Journal:  Biochim Biophys Acta       Date:  2011-06-22

3.  Entrance of the proton pathway in cbb3-type heme-copper oxidases.

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-12       Impact factor: 11.205

4.  A new method of identifying the site of tyrosyl radicals in proteins.

Authors:  Dimitri A Svistunenko; Chris E Cooper
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

Review 5.  Tryptophan or tyrosine? On the nature of the amino acid radical formed following hydrogen peroxide treatment of cytochrome c oxidase.

Authors:  Dimitri A Svistunenko; Mike T Wilson; Chris E Cooper
Journal:  Biochim Biophys Acta       Date:  2004-04-12

Review 6.  Important roles of tyrosines in photosystem II and cytochrome oxidase.

Authors:  Per E M Siegbahn; Margareta R A Blomberg
Journal:  Biochim Biophys Acta       Date:  2004-04-12

7.  Protein-tyrosyl radical interactions in photosystem II studied by electron spin resonance and electron nuclear double resonance spectroscopy: comparison with ribonucleotide reductase and in vitro tyrosine.

Authors:  C W Hoganson; G T Babcock
Journal:  Biochemistry       Date:  1992-12-01       Impact factor: 3.162

8.  Dioxygen activation and bond cleavage by mixed-valence cytochrome c oxidase.

Authors:  D A Proshlyakov; M A Pressler; G T Babcock
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

9.  A cytochrome C oxidase model catalyzes oxygen to water reduction under rate-limiting electron flux.

Authors:  James P Collman; Neal K Devaraj; Richard A Decréau; Ying Yang; Yi-Long Yan; Wataru Ebina; Todd A Eberspacher; Christopher E D Chidsey
Journal:  Science       Date:  2007-03-16       Impact factor: 47.728

10.  Tyrosine 167: the origin of the radical species observed in the reaction of cytochrome c oxidase with hydrogen peroxide in Paracoccus denitrificans.

Authors:  Kerstin Budiman; Aimo Kannt; Sevdalina Lyubenova; Oliver-Matthias H Richter; Bernd Ludwig; Hartmut Michel; Fraser MacMillan
Journal:  Biochemistry       Date:  2004-09-21       Impact factor: 3.162

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  14 in total

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Review 2.  Design and engineering of artificial oxygen-activating metalloenzymes.

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3.  Design of Heteronuclear Metalloenzymes.

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Journal:  Methods Enzymol       Date:  2016-07-26       Impact factor: 1.600

4.  Insights Into How Heme Reduction Potentials Modulate Enzymatic Activities of a Myoglobin-based Functional Oxidase.

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Journal:  Angew Chem Int Ed Engl       Date:  2017-05-04       Impact factor: 15.336

5.  Understanding and Modulating Metalloenzymes with Unnatural Amino Acids, Non-Native Metal Ions, and Non-Native Metallocofactors.

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Review 6.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

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Review 7.  Repurposing metalloproteins as mimics of natural metalloenzymes for small-molecule activation.

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Review 8.  Molecular understanding of heteronuclear active sites in heme-copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling.

Authors:  Christopher J Reed; Quan N Lam; Evan N Mirts; Yi Lu
Journal:  Chem Soc Rev       Date:  2021-03-01       Impact factor: 54.564

9.  Effect of myoglobin, hemin, and ferric iron on quality of chicken breast meat.

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10.  Significant Improvement of Oxidase Activity through the Genetic Incorporation of a Redox-active Unnatural Amino Acid.

Authors:  Yu Yang; Qing Zhou; Li Wang; Xiaohong Liu; Wei Zhang; Meirong Hu; Jianshu Dong; Jiasong Li; Lv Xiaoxuan; Hanlin Ouyang; Han Li; Feng Gao; Weimin Gong; Yi Lu; Jiangyun Wang
Journal:  Chem Sci       Date:  2015-04-13       Impact factor: 9.825

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