Literature DB >> 15723552

pH and kinetic isotope effects on sarcosine oxidation by N-methyltryptophan oxidase.

Erik C Ralph1, Paul F Fitzpatrick.   

Abstract

N-Methyltryptophan oxidase (MTOX), a flavoenzyme from Escherichia coli, catalyzes the oxidative demethylation of secondary amino acids such as N-methyltryptophan or N-methylglycine (sarcosine). MTOX is one of several flavin-dependent amine oxidases whose chemical mechanism is still debated. The kinetic properties of MTOX with the slow substrate sarcosine were determined. Initial rate data are well-described by the equation for a ping-pong kinetic mechanism, in that the V/K(O)()2 value is independent of the sarcosine concentration at all accessible concentrations of oxygen. The k(cat)/K(sarc) pH profile is bell-shaped, with pK(a) values of 8.8 and about 10; the latter value matches the pK(a) value of the substrate nitrogen. The k(cat) pH profile exhibits a single pK(a) value of 9.1 for a group that must be unprotonated for catalysis. There is no significant solvent isotope effect on the k(cat)/K(sarc) value. With N-methyl-(2)H(3)-glycine as the substrate, there is a pH-independent kinetic isotope effect on k(cat), k(cat)/K(sarc), and the rate constant for flavin reduction, with an average value of 7.2. Stopped-flow spectroscopy with both the protiated and deuterated substrate failed to detect any intermediates between the enzyme-substrate complex and the fully reduced enzyme. These results are used to evaluate proposed chemical mechanisms.

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Year:  2005        PMID: 15723552      PMCID: PMC1752209          DOI: 10.1021/bi047716h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  33 in total

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2.  Monomeric sarcosine oxidase: role of histidine 269 in catalysis.

Authors:  Gouhua Zhao; Hui Song; Zhi-Wei Chen; F Scott Mathews; Marilyn Schuman Jorns
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

3.  Structure of human monoamine oxidase B, a drug target for the treatment of neurological disorders.

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Authors:  Ethan C Settembre; Pieter C Dorrestein; Joo-Heon Park; Amy M Augustine; Tadhg P Begley; Steven E Ealick
Journal:  Biochemistry       Date:  2003-03-18       Impact factor: 3.162

5.  Monomeric sarcosine oxidase: structure of a covalently flavinylated amine oxidizing enzyme.

Authors:  P Trickey; M A Wagner; M S Jorns; F S Mathews
Journal:  Structure       Date:  1999-03-15       Impact factor: 5.006

6.  Inactivation of monomeric sarcosine oxidase by reaction with N-(cyclopropyl)glycine.

Authors:  G Zhao; J Qu; F A Davis; M S Jorns
Journal:  Biochemistry       Date:  2000-11-21       Impact factor: 3.162

7.  Characterization of the FAD-containing N-methyltryptophan oxidase from Escherichia coli.

Authors:  P Khanna; M Schuman Jorns
Journal:  Biochemistry       Date:  2001-02-06       Impact factor: 3.162

8.  N-methyltryptophan oxidase from Escherichia coli: reaction kinetics with N-methyl amino acid and carbinolamine substrates.

Authors:  P Khanna; M Schuman Jorns
Journal:  Biochemistry       Date:  2001-02-06       Impact factor: 3.162

9.  Monomeric sarcosine oxidase: evidence for an ionizable group in the E.S complex.

Authors:  Gouhua Zhao; Marilyn Schuman Jorns
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

10.  Solvent and primary deuterium isotope effects show that lactate CH and OH bond cleavages are concerted in Y254F flavocytochrome b2, consistent with a hydride transfer mechanism.

Authors:  Pablo Sobrado; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2003-12-30       Impact factor: 3.162

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  11 in total

1.  Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase.

Authors:  Erik C Ralph; Jennifer S Hirschi; Mark A Anderson; W Wallace Cleland; Daniel A Singleton; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2007-06-02       Impact factor: 3.162

2.  Mechanistic studies of the flavoenzyme tryptophan 2-monooxygenase: deuterium and 15N kinetic isotope effects on alanine oxidation by an L-amino acid oxidase.

Authors:  Erik C Ralph; Mark A Anderson; W Wallace Cleland; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2006-12-26       Impact factor: 3.162

3.  Rapid method using two microbial enzymes for detection of L-abrine in food as a marker for the toxic protein abrin.

Authors:  Anthony G Dodge; Kelvin Carrasquillo; Luis Rivera; Lei Xu; Lawrence P Wackett; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2014-12-19       Impact factor: 4.792

Review 4.  Combining solvent isotope effects with substrate isotope effects in mechanistic studies of alcohol and amine oxidation by enzymes.

Authors:  Paul F Fitzpatrick
Journal:  Biochim Biophys Acta       Date:  2014-10-30

5.  Pleiotropic impact of a single lysine mutation on biosynthesis of and catalysis by N-methyltryptophan oxidase.

Authors:  Robert C Bruckner; Jennifer Winans; Marilyn Schuman Jorns
Journal:  Biochemistry       Date:  2011-05-12       Impact factor: 3.162

6.  Mechanistic studies of human spermine oxidase: kinetic mechanism and pH effects.

Authors:  Mariya S Adachi; Paul R Juarez; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2010-01-19       Impact factor: 3.162

7.  Use of pH and kinetic isotope effects to establish chemistry as rate-limiting in oxidation of a peptide substrate by LSD1.

Authors:  Helena Gaweska; Michelle Henderson Pozzi; Dawn M Z Schmidt; Dewey G McCafferty; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

8.  Insights into the mechanisms of flavoprotein oxidases from kinetic isotope effects.

Authors:  Paul F Fitzpatrick
Journal:  J Labelled Comp Radiopharm       Date:  2007-10       Impact factor: 1.921

9.  Mechanistic and structural studies of H373Q flavocytochrome b2: effects of mutating the active site base.

Authors:  Chi-Lin Tsai; Kuppan Gokulan; Pablo Sobrado; James C Sacchettini; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2007-06-12       Impact factor: 3.162

Review 10.  Oxidation of amines by flavoproteins.

Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2009-08-03       Impact factor: 4.013

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