Literature DB >> 12409621

Investigation of possible free-radical scavengers and metrics for radiation damage in protein cryocrystallography.

James Murray1, Elspeth Garman.   

Abstract

The introduction of highly intense wiggler and undulator beamlines has reintroduced the problem of X-ray radiation damage in protein crystals even at cryogenic temperatures. Several metrics for monitoring radiation damage are considered and unit-cell volume expansion is systematically investigated using crystals of three different types, but it is found to be too variable to be a useful metric. Radical scavengers of secondary radiation damage are investigated as possible mitigating agents. Styrene is found to be ineffective. A method of spectroscopically measuring the radiation damage with a microspectrophotometer was used and, in conjunction with crystallographic data, provided tentative but suggestive evidence for the efficacy of ascorbate as a free-radical scavenging agent in cryocooled hen egg-white lysozyme crystals.

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Year:  2002        PMID: 12409621     DOI: 10.1107/s0909049502014632

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  34 in total

1.  Global radiation damage at 300 and 260 K with dose rates approaching 1 MGy s⁻¹.

Authors:  Matthew Warkentin; Ryan Badeau; Jesse B Hopkins; Anne M Mulichak; Lisa J Keefe; Robert E Thorne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-01-17

2.  On the accuracy of unit-cell parameters in protein crystallography.

Authors:  Zbigniew Dauter; Alexander Wlodawer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-10-31

3.  Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage.

Authors:  Anatoly P Dubnovitsky; Raimond B G Ravelli; Alexander N Popov; Anastassios C Papageorgiou
Journal:  Protein Sci       Date:  2005-05-09       Impact factor: 6.725

4.  Measurements of accurate x-ray scattering data of protein solutions using small stationary sample cells.

Authors:  Xinguo Hong; Quan Hao
Journal:  Rev Sci Instrum       Date:  2009-01       Impact factor: 1.523

5.  Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.

Authors:  Johan Hattne; Dan Shi; Calina Glynn; Chih-Te Zee; Marcus Gallagher-Jones; Michael W Martynowycz; Jose A Rodriguez; Tamir Gonen
Journal:  Structure       Date:  2018-04-26       Impact factor: 5.006

6.  Feasibility of one-shot-per-crystal structure determination using Laue diffraction.

Authors:  Sterling Cornaby; Doletha M E Szebenyi; Detlef-M Smilgies; David J Schuller; Richard Gillilan; Quan Hao; Donald H Bilderback
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

7.  To scavenge or not to scavenge: that is the question.

Authors:  Elzbieta Nowak; Anna Brzuszkiewicz; Miroslawa Dauter; Zbigniew Dauter; Gerd Rosenbaum
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-08-14

8.  Cryoradiolytic reduction of heme proteins: Maximizing dose dependent yield.

Authors:  Ilia G Denisov; Doreen C Victoria; Stephen G Sligar
Journal:  Radiat Phys Chem Oxf Engl 1993       Date:  2007-04       Impact factor: 2.858

9.  Energy dependence of site-specific radiation damage in protein crystals.

Authors:  Christina Homer; Laura Cooper; Ana Gonzalez
Journal:  J Synchrotron Radiat       Date:  2011-03-15       Impact factor: 2.616

10.  Origin and temperature dependence of radiation damage in biological samples at cryogenic temperatures.

Authors:  Alke Meents; Sascha Gutmann; Armin Wagner; Clemens Schulze-Briese
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-28       Impact factor: 11.205

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