Literature DB >> 18379640

Cryoradiolytic reduction of heme proteins: Maximizing dose dependent yield.

Ilia G Denisov1, Doreen C Victoria, Stephen G Sligar.   

Abstract

Radiolytic reduction in frozen solutions and crystals is a useful method for generation of trapped intermediates in protein based radical reactions. In this communication we define the conditions which provide the maximum yield of one electron reduced myoglobin at 77 K using (60)Co γ-irradiation in aqueous glycerol glass. The yield reached 50% after 20 kGy, was almost complete at ∼160 kGy total dose, and does not depend on the protein concentration in the range 0.01 - 5 mM.

Entities:  

Year:  2007        PMID: 18379640      PMCID: PMC2131698          DOI: 10.1016/j.radphyschem.2006.03.002

Source DB:  PubMed          Journal:  Radiat Phys Chem Oxf Engl 1993        ISSN: 0969-806X            Impact factor:   2.858


  28 in total

1.  Protein dynamics in an intermediate state of myoglobin: optical absorption, resonance Raman spectroscopy, and x-ray structure analysis.

Authors:  N Engler; A Ostermann; A Gassmann; D C Lamb; V E Prusakov; J Schott; R Schweitzer-Stenner; F G Parak
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Cryoradiolysis for the study of P450 reaction intermediates.

Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

Review 3.  Physical and chemical considerations of damage induced in protein crystals by synchrotron radiation: a radiation chemical perspective.

Authors:  Peter O'Neill; David L Stevens; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2002-11-01       Impact factor: 2.616

Review 4.  Structure and chemistry of cytochrome P450.

Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar; Ilme Schlichting
Journal:  Chem Rev       Date:  2005-06       Impact factor: 60.622

Review 5.  Cryocooling and radiation damage in macromolecular crystallography.

Authors:  Elspeth F Garman; Robin Leslie Owen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

6.  The importance of vibronic perturbations in ferrocytochrome c spectra: a reevaluation of spectral properties based on low-temperature optical absorption, resonance Raman, and molecular-dynamics simulations.

Authors:  Matteo Levantino; Qing Huang; Antonio Cupane; Monique Laberge; Andrew Hagarman; Reinhard Schweitzer-Stenner
Journal:  J Chem Phys       Date:  2005-08-01       Impact factor: 3.488

7.  Trapped free radicals and electrons in organic glasses.

Authors:  J E Willard
Journal:  Science       Date:  1973-05-11       Impact factor: 47.728

8.  Thirty years of microbial P450 monooxygenase research: peroxo-heme intermediates--the central bus station in heme oxygenase catalysis.

Authors:  Stephen G Sligar; Thomas M Makris; Ilia G Denisov
Journal:  Biochem Biophys Res Commun       Date:  2005-08-24       Impact factor: 3.575

9.  Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase, the active intermediate of enzymatic heme oxygenation.

Authors:  Ilia G Denisov; Masao Ikeda-Saito; Tadashi Yoshida; Stephen G Sligar
Journal:  FEBS Lett       Date:  2002-12-04       Impact factor: 4.124

10.  Conformational fluctuation of native-like and molten-globule-like cytochrome c observed by time-resolved hole burning.

Authors:  Y Shibata; H Takahashi; R Kaneko; A Kurita; T Kushida
Journal:  Biochemistry       Date:  1999-02-09       Impact factor: 3.162

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  9 in total

Review 1.  Cytochromes P450 in nanodiscs.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Biochim Biophys Acta       Date:  2010-06-08

2.  The critical iron-oxygen intermediate in human aromatase.

Authors:  Stephanie L Gantt; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2009-07-08       Impact factor: 3.575

3.  Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.

Authors:  Bin Liu; Ying Chen; Tzanko Doukov; S Michael Soltis; C David Stout; James A Fee
Journal:  Biochemistry       Date:  2009-02-10       Impact factor: 3.162

4.  The ferric-hydroperoxo complex of chloroperoxidase.

Authors:  Ilia G Denisov; John H Dawson; Lowell P Hager; Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2007-10-01       Impact factor: 3.575

5.  Cryoradiolysis and cryospectroscopy for studies of heme-oxygen intermediates in cytochromes p450.

Authors:  I G Denisov; Y V Grinkova; S G Sligar
Journal:  Methods Mol Biol       Date:  2012

6.  Revealing low-dose radiation damage using single-crystal spectroscopy.

Authors:  Robin L Owen; Briony A Yorke; James A Gowdy; Arwen R Pearson
Journal:  J Synchrotron Radiat       Date:  2011-03-19       Impact factor: 2.616

7.  X-ray-induced photoreduction of heme metal centers rapidly induces active-site perturbations in a protein-independent manner.

Authors:  Vera Pfanzagl; John H Beale; Hanna Michlits; Daniel Schmidt; Thomas Gabler; Christian Obinger; Kristina Djinović-Carugo; Stefan Hofbauer
Journal:  J Biol Chem       Date:  2020-07-28       Impact factor: 5.486

Review 8.  Radiation damage and derivatization in macromolecular crystallography: a structure factor's perspective.

Authors:  Robin L Owen; Darren A Sherrell
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-01       Impact factor: 7.652

9.  Towards the spatial resolution of metalloprotein charge states by detailed modeling of XFEL crystallographic diffraction.

Authors:  Nicholas K Sauter; Jan Kern; Junko Yano; James M Holton
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-02-04       Impact factor: 7.652

  9 in total

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