Literature DB >> 12123580

Fitness effects of fixed beneficial mutations in microbial populations.

Daniel E Rozen1, J Arjan G M de Visser, Philip J Gerrish.   

Abstract

Beneficial mutations are intuitively relevant to understanding adaptation, yet not all beneficial mutations are of consequence to the long-term evolutionary outcome of adaptation. Many beneficial mutations-mostly those of small effect-are lost due either to (1) genetic drift or to (2) competition among clones carrying different beneficial mutations, a phenomenon called the "Hill-Robertson effect" for sexual populations and "clonal interference" for asexual populations. Competition among clones becomes more prevalent with increasing genetic linkage and increasing population size, and it is thus generally characteristic of microbial populations. Together, these two phenomena suggest that only those beneficial mutations of large fitness effect should achieve fixation, despite the fact that most beneficial mutations produced are predicted to have very small fitness effects. Here, we confirm this prediction-both empirically and theoretically-by showing that fitness effects of fixed beneficial mutations follow a distribution whose mode is positive.

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Year:  2002        PMID: 12123580     DOI: 10.1016/s0960-9822(02)00896-5

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  91 in total

1.  The distribution of fitness effects among beneficial mutations.

Authors:  H Allen Orr
Journal:  Genetics       Date:  2003-04       Impact factor: 4.562

2.  The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus.

Authors:  Rafael Sanjuán; Andrés Moya; Santiago F Elena
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-24       Impact factor: 11.205

3.  The speed of adaptation in large asexual populations.

Authors:  Claus O Wilke
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

4.  Stickbreaking: a novel fitness landscape model that harbors epistasis and is consistent with commonly observed patterns of adaptive evolution.

Authors:  Anna C Nagel; Paul Joyce; Holly A Wichman; Craig R Miller
Journal:  Genetics       Date:  2011-11-17       Impact factor: 4.562

5.  Real time forecasting of near-future evolution.

Authors:  Philip J Gerrish; Paul D Sniegowski
Journal:  J R Soc Interface       Date:  2012-04-18       Impact factor: 4.118

6.  Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.

Authors:  Benjamin H Good; Igor M Rouzine; Daniel J Balick; Oskar Hallatschek; Michael M Desai
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

7.  The distribution of fitness effects of new beneficial mutations in Pseudomonas fluorescens.

Authors:  Michael J McDonald; Tim F Cooper; Hubertus J E Beaumont; Paul B Rainey
Journal:  Biol Lett       Date:  2010-07-21       Impact factor: 3.703

Review 8.  Beneficial mutations and the dynamics of adaptation in asexual populations.

Authors:  Paul D Sniegowski; Philip J Gerrish
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

Review 9.  The population genetics of beneficial mutations.

Authors:  H Allen Orr
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

10.  Mutational effects and population dynamics during viral adaptation challenge current models.

Authors:  Craig R Miller; Paul Joyce; Holly A Wichman
Journal:  Genetics       Date:  2010-11-01       Impact factor: 4.562

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