Literature DB >> 11519749

Dipolar filtered 1H-13C heteronuclear correlation spectroscopy for resonance assignment of proteins.

X L Yao1, M Hong.   

Abstract

Resonance assignment is necessary for the comprehensive structure determination of insoluble proteins by solid-state NMR spectroscopy. While various 2D and 3D correlation techniques involving 13C and 15N spins have been developed for this purpose, H chemical shift has not been exploited sufficiently. We demonstrate the combination of the regular 1H-13C heteronuclear correlation (HETCOR) experiment and a dipolar filtered HETCOR technique to obtain better resolved 1H chemical shift spectra. The dipolar filtered experiment, MELODI-HETCOR. simplifies the 1H spectra by suppressing the directly bonded C-H correlation peaks and retaining only the medium- and long-range cross peaks. We apply this MELODI-HETCOR technique to several amino acids and proteins with various isotopic labeling patterns. The enhanced 1H chemical shift resolution allows the assignment of overlapping H alpha and H beta resonances in Ser, identifies the 1H chemical shift differences between neutral and cationic imidazole rings of His, and permits the assignment of residues with side chain nitrogen atoms in ubiquitin. The potential utility of this dipolar filtered HETCOR technique to resonance assignment of extensively labeled proteins is discussed.

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Year:  2001        PMID: 11519749     DOI: 10.1023/a:1011251924874

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  14 in total

1.  Selective and extensive 13C labeling of a membrane protein for solid-state NMR investigations.

Authors:  M Hong; K Jakes
Journal:  J Biomol NMR       Date:  1999-05       Impact factor: 2.835

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3.  A solid-state NMR index of helical membrane protein structure and topology.

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Journal:  J Magn Reson       Date:  2000-05       Impact factor: 2.229

4.  Determination of multiple ***φ***-torsion angles in proteins by selective and extensive (13)C labeling and two-dimensional solid-state NMR.

Authors:  M Hong
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

5.  Elucidation of Dipolar Coupling Networks under Magic-Angle Spinning

Authors: 
Journal:  J Magn Reson       Date:  1997-03       Impact factor: 2.229

6.  Resonance assignment of 13C/15N labeled solid proteins by two- and three-dimensional magic-angle-spinning NMR.

Authors:  M Hong
Journal:  J Biomol NMR       Date:  1999-09       Impact factor: 2.835

7.  Two-dimensional 1H/13C heteronuclear chemical shift correlation spectroscopy of lipid bilayers.

Authors:  C W Lee; R G Griffin
Journal:  Biophys J       Date:  1989-02       Impact factor: 4.033

8.  Solid-state NMR triple-resonance backbone assignments in a protein.

Authors:  W M Tan; Z Gu; A C Zeri; S J Opella
Journal:  J Biomol NMR       Date:  1999-04       Impact factor: 2.835

9.  Sample optimization and identification of signal patterns of amino acid side chains in 2D RFDR spectra of the alpha-spectrin SH3 domain.

Authors:  J Pauli; B van Rossum; H Förster; H J de Groot; H Oschkinat
Journal:  J Magn Reson       Date:  2000-04       Impact factor: 2.229

10.  Sequential backbone assignment of isotopically enriched proteins in D2O by deuterium-decoupled HA(CA)N and HA(CACO)N.

Authors:  A C Wang; S Grzesiek; R Tschudin; P J Lodi; A Bax
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-15       Impact factor: 11.205

Review 4.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

5.  Cellulose-Pectin Spatial Contacts Are Inherent to Never-Dried Arabidopsis Primary Cell Walls: Evidence from Solid-State Nuclear Magnetic Resonance.

Authors:  Tuo Wang; Yong Bum Park; Daniel J Cosgrove; Mei Hong
Journal:  Plant Physiol       Date:  2015-06-02       Impact factor: 8.340

6.  1H-Detected REDOR with Fast Magic-Angle Spinning of a Deuterated Protein.

Authors:  Manali Ghosh; Chad M Rienstra
Journal:  J Phys Chem B       Date:  2017-08-31       Impact factor: 2.991

7.  Water-protein interactions of an arginine-rich membrane peptide in lipid bilayers investigated by solid-state nuclear magnetic resonance spectroscopy.

Authors:  Shenhui Li; Yongchao Su; Wenbin Luo; Mei Hong
Journal:  J Phys Chem B       Date:  2010-03-25       Impact factor: 2.991

8.  Cellulose Structural Polymorphism in Plant Primary Cell Walls Investigated by High-Field 2D Solid-State NMR Spectroscopy and Density Functional Theory Calculations.

Authors:  Tuo Wang; Hui Yang; James D Kubicki; Mei Hong
Journal:  Biomacromolecules       Date:  2016-05-26       Impact factor: 6.988

9.  Probing membrane protein structure using water polarization transfer solid-state NMR.

Authors:  Jonathan K Williams; Mei Hong
Journal:  J Magn Reson       Date:  2014-08-25       Impact factor: 2.229

  9 in total

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