Literature DB >> 28816462

1H-Detected REDOR with Fast Magic-Angle Spinning of a Deuterated Protein.

Manali Ghosh1, Chad M Rienstra1,2,3.   

Abstract

Rotational echo double resonance (REDOR) is a highly successful method for heteronuclear distance determination in biological solid-state NMR, and 1H detection methods have emerged in recent years as a powerful approach to improving sensitivity and resolution for small sample quantities by utilizing fast magic-angle spinning (>30 kHz) and deuteration strategies. In theory, involving 1H as one of the spins for measuring REDOR effects can greatly increase the distance measurement range, but few experiments of this type have been reported. Here we introduce a pulse sequence that combines frequency-selective REDOR (FSR) with 1H detection. We demonstrate this method with applications to samples of uniformly 13C,15N,2H-labeled alanine and uniformly 13C,2H,15N-labeled GB1 protein, back-exchanged with 30% H2O and 70% D2O, employing a variety of frequency-selective 13C pulses to highlight unique spectral features. The resulting, robust REDOR effects provide (1) tools for resonance assignment, (2) restraints of secondary structure, (3) probes of tertiary structure, and (4) approaches to determine the preferred orientation of aromatic rings in the protein core.

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Year:  2017        PMID: 28816462      PMCID: PMC5673488          DOI: 10.1021/acs.jpcb.7b07313

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  32 in total

1.  Solid-state protein-structure determination with proton-detected triple-resonance 3D magic-angle-spinning NMR spectroscopy.

Authors:  Donghua H Zhou; John J Shea; Andrew J Nieuwkoop; W Trent Franks; Benjamin J Wylie; Charles Mullen; Dennis Sandoz; Chad M Rienstra
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

2.  Optimum levels of exchangeable protons in perdeuterated proteins for proton detection in MAS solid-state NMR spectroscopy.

Authors:  Umit Akbey; Sascha Lange; W Trent Franks; Rasmus Linser; Kristina Rehbein; Anne Diehl; Barth-Jan van Rossum; Bernd Reif; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2009-08-22       Impact factor: 2.835

3.  Medium-range order in sodium phosphate glasses: a quantitative rotational echo double resonance solid state NMR study.

Authors:  Wenzel Strojek; Hellmut Eckert
Journal:  Phys Chem Chem Phys       Date:  2006-04-12       Impact factor: 3.676

4.  Selective interface detection: mapping binding site contacts in membrane proteins by NMR spectroscopy.

Authors:  Suzanne R Kiihne; Alain F L Creemers; Willem J de Grip; Petra H M Bovee-Geurts; Johan Lugtenburg; Huub J M de Groot
Journal:  J Am Chem Soc       Date:  2005-04-27       Impact factor: 15.419

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Dipolar filtered 1H-13C heteronuclear correlation spectroscopy for resonance assignment of proteins.

Authors:  X L Yao; M Hong
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

7.  Efficient low-power heteronuclear decoupling in 13C high-resolution solid-state NMR under fast magic angle spinning.

Authors:  Mrignayani Kotecha; Nalinda P Wickramasinghe; Yoshitaka Ishii
Journal:  Magn Reson Chem       Date:  2007-12       Impact factor: 2.447

8.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

9.  REDOR NMR for drug discovery.

Authors:  Lynette Cegelski
Journal:  Bioorg Med Chem Lett       Date:  2013-08-22       Impact factor: 2.823

10.  Molecular structure of β-amyloid fibrils in Alzheimer's disease brain tissue.

Authors:  Jun-Xia Lu; Wei Qiang; Wai-Ming Yau; Charles D Schwieters; Stephen C Meredith; Robert Tycko
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

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  5 in total

1.  Rapid measurement of long-range distances in proteins by multidimensional 13C-19F REDOR NMR under fast magic-angle spinning.

Authors:  Alexander A Shcherbakov; Mei Hong
Journal:  J Biomol NMR       Date:  2018-05-21       Impact factor: 2.835

Review 2.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

Review 3.  Advances in instrumentation and methodology for solid-state NMR of biological assemblies.

Authors:  Rachel W Martin; John E Kelly; Jessica I Kelz
Journal:  J Struct Biol       Date:  2018-09-08       Impact factor: 2.867

Review 4.  From Angstroms to Nanometers: Measuring Interatomic Distances by Solid-State NMR.

Authors:  Alexander A Shcherbakov; João Medeiros-Silva; Nhi Tran; Martin D Gelenter; Mei Hong
Journal:  Chem Rev       Date:  2021-10-25       Impact factor: 72.087

5.  Transferred-Rotational-Echo Double Resonance.

Authors:  Xizhou Cecily Zhang; Marcel C Forster; Evgeny Nimerovsky; Kumar Tekwani Movellan; Loren B Andreas
Journal:  J Phys Chem A       Date:  2021-01-19       Impact factor: 2.781

  5 in total

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