Literature DB >> 22303079

Exploring Chromophore-Binding Pocket: High-Resolution Solid-State H-C Interfacial Correlation NMR Spectra with Windowed PMLG Scheme.

Chen Song, Christina Lang, Jo Mailliet, Jon Hughes, Wolfgang Gärtner, Jörg Matysik.   

Abstract

High-resolution two-dimensional (2D) (1)H-(13)C heteronuclear correlation spectra are recorded for selective observation of interfacial 3-5.5 Å contacts of the uniformly (13)C-labeled phycocyanobilin (PCB) chromophore with its unlabeled binding pocket. The experiment is based on a medium- and long-distance heteronuclear correlation (MELODI-HETCOR) method. For improving (1)H spectral resolution, a windowed phase-modulated Lee-Goldburg (wPMLG) decoupling scheme is applied during the t(1) evolution period. Our approach allows for identification of chromophore-protein interactions, in particular for elucidation of the hydrogen-bonding networks and charge distributions within the chromophore-binding pocket. The resulting pulse sequence is tested on the cyanobacterial (Cph1) phytochrome sensory module (residues 1-514, Cph1Δ2) containing uniformly (13)C- and (15)N-labeled PCB chromophore (u-[(13)C,(15)N]-PCB-Cph1Δ2) at 17.6 T.

Entities:  

Year:  2011        PMID: 22303079      PMCID: PMC3260431          DOI: 10.1007/s00723-011-0196-6

Source DB:  PubMed          Journal:  Appl Magn Reson        ISSN: 0937-9347            Impact factor:   0.831


  34 in total

Review 1.  High-resolution 1H NMR spectroscopy in the solid state: very fast sample rotation and multiple-quantum coherences.

Authors:  I Schnell; H W Spiess
Journal:  J Magn Reson       Date:  2001-08       Impact factor: 2.229

2.  Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy.

Authors:  Federica Castellani; Barth van Rossum; Annette Diehl; Mario Schubert; Kristina Rehbein; Hartmut Oschkinat
Journal:  Nature       Date:  2002-11-07       Impact factor: 49.962

3.  Improvement of homonuclear dipolar decoupling sequences in solid-state nuclear magnetic resonance utilising radiofrequency imperfections.

Authors:  Leon Bosman; P K Madhu; Shimon Vega; Elena Vinogradov
Journal:  J Magn Reson       Date:  2004-07       Impact factor: 2.229

Review 4.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

5.  Raman spectroscopic and light-induced kinetic characterization of a recombinant phytochrome of the cyanobacterium Synechocystis.

Authors:  A Remberg; I Lindner; T Lamparter; J Hughes; C Kneip; P Hildebrandt; S E Braslavsky; W Gärtner; K Schaffner
Journal:  Biochemistry       Date:  1997-10-28       Impact factor: 3.162

6.  Toxin-induced conformational changes in a potassium channel revealed by solid-state NMR.

Authors:  Adam Lange; Karin Giller; Sönke Hornig; Marie-France Martin-Eauclaire; Olaf Pongs; Stefan Becker; Marc Baldus
Journal:  Nature       Date:  2006-04-13       Impact factor: 49.962

7.  Fourier-transform infrared spectroscopy of phytochrome: difference spectra of the intermediates of the photoreactions.

Authors:  H Foerstendorf; E Mummert; E Schäfer; H Scheer; F Siebert
Journal:  Biochemistry       Date:  1996-08-20       Impact factor: 3.162

8.  Experimental aspects of proton NMR spectroscopy in solids using phase-modulated homonuclear dipolar decoupling.

Authors:  Anne Lesage; Dimitris Sakellariou; Sabine Hediger; Bénédicte Eléna; Patrick Charmont; Stefan Steuernagel; Lyndon Emsley
Journal:  J Magn Reson       Date:  2003-07       Impact factor: 2.229

9.  Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core.

Authors:  Christian Wasmer; Adam Lange; Hélène Van Melckebeke; Ansgar B Siemer; Roland Riek; Beat H Meier
Journal:  Science       Date:  2008-03-14       Impact factor: 47.728

10.  Dipolar truncation in magic-angle spinning NMR recoupling experiments.

Authors:  Marvin J Bayro; Matthias Huber; Ramesh Ramachandran; Timothy C Davenport; Beat H Meier; Matthias Ernst; Robert G Griffin
Journal:  J Chem Phys       Date:  2009-03-21       Impact factor: 3.488

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