Literature DB >> 10921775

A new method for the simultaneous measurement of magnitude and sign of 1DCH and 1DHH dipolar couplings in methylene groups.

T Carlomagno1, W Peti, C Griesinger.   

Abstract

Heteronuclear dipolar couplings of the protein backbone have proven to have a big impact on the accuracy of protein NMR structures. H,H dipolar couplings might have the same impact on side chains. Here we present a method that combines both heteronuclear and homonuclear dipolar couplings to investigate the local conformation of methylene groups. A new pulse sequence (SPITZE-HSQC) is presented, that allows to measure the two C,H and the H,H dipolar couplings at the same time, using spin state selective transfers. The new method has been applied to the methylene groups of glycines in the protein ubiquitin. The C,H and the H,H dipolar couplings might have a key role in fast stereospecific assignment of protons in CH2 groups.

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Year:  2000        PMID: 10921775     DOI: 10.1023/a:1008346902500

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  10 in total

1.  Domain orientation and dynamics in multidomain proteins from residual dipolar couplings.

Authors:  M W Fischer; J A Losonczi; J L Weaver; J H Prestegard
Journal:  Biochemistry       Date:  1999-07-13       Impact factor: 3.162

2.  Accurate measurement of H(N)-H(alpha) residual dipolar couplings in proteins.

Authors:  M Cai; H Wang; E T Olejniczak; R P Meadows; A H Gunasekera; N Xu; S W Fesik
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

3.  Improved dilute bicelle solutions for high-resolution NMR of biological macromolecules.

Authors:  J A Losonczi; J H Prestegard
Journal:  J Biomol NMR       Date:  1998-10       Impact factor: 2.835

4.  Integration of spin-state-selective excitation into 2D NMR correlation experiments with the heteronuclear ZQ/2Q pi rotations for 1JXH- resolved E.COSY-type measurements of heteronuclear coupling constants in proteins.

Authors:  A Meissner; J O Duus; O W Sørensen
Journal:  J Biomol NMR       Date:  1997-07       Impact factor: 2.835

5.  Unitary control in quantum ensembles: maximizing signal intensity in coherent spectroscopy

Authors: 
Journal:  Science       Date:  1998-04-17       Impact factor: 47.728

6.  Structure of ubiquitin refined at 1.8 A resolution.

Authors:  S Vijay-Kumar; C E Bugg; W J Cook
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

7.  Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium.

Authors:  N Tjandra; A Bax
Journal:  Science       Date:  1997-11-07       Impact factor: 47.728

8.  New methylene specific experiments for the measurement of scalar spin-spin coupling constants between protons attached to 13C.

Authors:  T Carlomagno; H Schwalbe; A Rexroth; O W Sorensen; C Griesinger
Journal:  J Magn Reson       Date:  1998-11       Impact factor: 2.229

9.  Measurement of dipolar couplings for methylene and methyl sites in weakly oriented macromolecules and their use in structure determination.

Authors:  M Ottiger; F Delaglio; J L Marquardt; N Tjandra; A Bax
Journal:  J Magn Reson       Date:  1998-10       Impact factor: 2.229

10.  Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution.

Authors:  J R Tolman; J M Flanagan; M A Kennedy; J H Prestegard
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

  10 in total
  10 in total

1.  Nuclear overhauser spectroscopy of chiral CHD methylene groups.

Authors:  Rafal Augustyniak; Jan Stanek; Henri Colaux; Geoffrey Bodenhausen; Wiktor Koźmiński; Torsten Herrmann; Fabien Ferrage
Journal:  J Biomol NMR       Date:  2015-11-27       Impact factor: 2.835

2.  Measurement of eight scalar and dipolar couplings for methine-methylene pairs in proteins and nucleic acids.

Authors:  Emeric Miclet; Jérôme Boisbouvier; Ad Bax
Journal:  J Biomol NMR       Date:  2005-03       Impact factor: 2.835

3.  Simultaneous alpha/beta spin-state selection for (13)C and (15)N from a time-shared HSQC-IPAP experiment.

Authors:  Pau Nolis; Teodor Parella
Journal:  J Biomol NMR       Date:  2006-12-12       Impact factor: 2.835

4.  Interference between cross-correlated relaxation and the measurement of scalar and dipolar couplings by Quantitative J.

Authors:  Eva de Alba; Nico Tjandra
Journal:  J Biomol NMR       Date:  2006-05-19       Impact factor: 2.835

5.  Measurement and application of 1H-19F dipolar couplings in the structure determination of 2'-fluorolabeled RNA.

Authors:  B Luy; J P Marino
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

6.  Multiplet component separation for measurement of methyl 13C-1H dipolar couplings in weakly aligned proteins.

Authors:  G Kontaxis; A Bax
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

7.  A spin-state-selective experiment for measuring heteronuclear one-bond and homonuclear two-bond couplings from an HSQC-type spectrum.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2002-01       Impact factor: 2.835

8.  Lanthanide induced residual dipolar couplings for the conformational investigation of peripheral 15NH2 moieties.

Authors:  I Bertini; I C Felli; C Luchinat
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

9.  Measurement of residual dipolar couplings from 1Halpha to 13Calpha and 15N using a simple HNCA-based experiment.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

10.  Biosynthetically directed ²H labelling for stereospecific resonance assignments of glycine methylene groups.

Authors:  Karin V Loscha; Gottfried Otting
Journal:  J Biomol NMR       Date:  2012-11-29       Impact factor: 2.835

  10 in total

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