Literature DB >> 10878056

Detection of Herpes simplex virus DNA by real-time PCR.

H H Kessler1, G Mühlbauer, B Rinner, E Stelzl, A Berger, H W Dörr, B Santner, E Marth, H Rabenau.   

Abstract

Molecular detection of herpes simplex virus (HSV) DNA is recognized as the reference standard assay method for the sensitive and specific diagnosis of central nervous system infections caused by HSV. In this study, a molecular assay based on real-time PCR on the LightCycler (LC) instrument was evaluated and compared with a home-brew molecular assay. The detection limit of the LC assay was determined with 10-fold dilutions of plasmid pS4 with the SalI restriction fragment of the DNA polymerase gene and with the First European Union Concerted Action HSV Proficiency Panel. A total of 59 cerebrospinal fluid (CSF) specimens were investigated for the comparative study. With plasmid pS4, the detection limit of the LC assay was found to be 10(4) copies per ml, i.e., 12.5 copies per run. When samples of the First European Union Concerted Action HSV Proficiency Panel were tested, 2x10(3) to 5x10(3) HSV type 1 genome equivalents (GE) per ml, i.e., 2.5 to 6.3 GE per run, could consistently be detected. There was a correlation between the LC assay and the home-brew assay in 55 of 59 specimens. In conclusion, the LC assay allows very rapid detection of HSV DNA in CSF. It was found to be laborsaving and showed sufficient sensitivity.

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Year:  2000        PMID: 10878056      PMCID: PMC86985     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  28 in total

1.  Diagnosis of herpes encephalitis via Southern blotting of cerebrospinal fluid DNA amplified by polymerase chain reaction.

Authors:  P E Klapper; G M Cleator; C Dennett; A G Lewis
Journal:  J Med Virol       Date:  1990-12       Impact factor: 2.327

2.  Non-invasive diagnosis of herpes simplex encephalitis.

Authors:  K F Powell; N E Anderson; R W Frith; M C Croxson
Journal:  Lancet       Date:  1990-02-10       Impact factor: 79.321

3.  Rapid detection of herpes-simplex-virus DNA in cerebrospinal fluid of patients with herpes simplex encephalitis.

Authors:  A H Rowley; R J Whitley; F D Lakeman; S M Wolinsky
Journal:  Lancet       Date:  1990-02-24       Impact factor: 79.321

4.  Amplification and characterization of herpesvirus DNA in cerebrospinal fluid from patients with acute encephalitis.

Authors:  F Rozenberg; P Lebon
Journal:  J Clin Microbiol       Date:  1991-11       Impact factor: 5.948

5.  Rapid detection of cutaneous herpes simplex virus infection with the polymerase chain reaction.

Authors:  M Cao; X Xiao; B Egbert; T M Darragh; T S Yen
Journal:  J Invest Dermatol       Date:  1989-03       Impact factor: 8.551

6.  Nucleotide sequence of the DNA polymerase gene of herpes simplex virus type 2 and comparison with the type 1 counterpart.

Authors:  T Tsurumi; K Maeno; Y Nishiyama
Journal:  Gene       Date:  1987       Impact factor: 3.688

7.  Detection of herpes simplex virus DNA in cutaneous lesions of erythema multiforme.

Authors:  S L Brice; D Krzemien; W L Weston; J C Huff
Journal:  J Invest Dermatol       Date:  1989-07       Impact factor: 8.551

8.  DNA sequence analysis of the type-common glycoprotein-D genes of herpes simplex virus types 1 and 2.

Authors:  L A Lasky; D J Dowbenko
Journal:  DNA       Date:  1984

9.  Herpes simplex virus infections of the central nervous system in human immunodeficiency virus-infected patients: clinical management by polymerase chain reaction assay of cerebrospinal fluid.

Authors:  P Cinque; L Vago; R Marenzi; B Giudici; T Weber; R Corradini; D Ceresa; A Lazzarin; A Linde
Journal:  Clin Infect Dis       Date:  1998-08       Impact factor: 9.079

10.  Related functional domains in virus DNA polymerases.

Authors:  B A Larder; S D Kemp; G Darby
Journal:  EMBO J       Date:  1987-01       Impact factor: 11.598

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  67 in total

1.  Rapid detection of enterovirus RNA in cerebrospinal fluid specimens with a novel single-tube real-time reverse transcription-PCR assay.

Authors:  W A Verstrepen; S Kuhn; M M Kockx; M E Van De Vyvere; A H Mertens
Journal:  J Clin Microbiol       Date:  2001-11       Impact factor: 5.948

2.  Quantitative real-time PCR detection of Rift Valley fever virus and its application to evaluation of antiviral compounds.

Authors:  S Garcia; J M Crance; A Billecocq; A Peinnequin; A Jouan; M Bouloy; D Garin
Journal:  J Clin Microbiol       Date:  2001-12       Impact factor: 5.948

3.  LightCycler multiplex PCR for the laboratory diagnosis of common viral infections of the central nervous system.

Authors:  S J Read; J L Mitchell; C G Fink
Journal:  J Clin Microbiol       Date:  2001-09       Impact factor: 5.948

Review 4.  Real-time PCR in virology.

Authors:  Ian M Mackay; Katherine E Arden; Andreas Nitsche
Journal:  Nucleic Acids Res       Date:  2002-03-15       Impact factor: 16.971

5.  Improving real-time PCR genotyping assays by asymmetric amplification.

Authors:  Kevin Barratt; John F Mackay
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

Review 6.  The use of hydrolysis and hairpin probes in real-time PCR.

Authors:  Susan M McChlery; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2003-11       Impact factor: 2.695

7.  Failure to genotype herpes simplex virus by real-time PCR assay and melting curve analysis due to sequence variation within probe binding sites.

Authors:  Trevor P Anderson; Anja M Werno; Kirsten A Beynon; David R Murdoch
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

8.  Testing for Herpes Simplex Virus in Low-Volume Cerebrospinal Fluid Samples: Comparison of Three Protocols To Optimize Detection.

Authors:  Mark J Espy; Cole L Irish; Matthew J Binnicker
Journal:  J Clin Microbiol       Date:  2015-12       Impact factor: 5.948

9.  Development and Validation of a Laboratory-Developed Multiplex Real-Time PCR Assay on the BD Max System for Detection of Herpes Simplex Virus and Varicella-Zoster Virus DNA in Various Clinical Specimens.

Authors:  Sylvie Pillet; Paul O Verhoeven; Amélie Epercieux; Thomas Bourlet; Bruno Pozzetto
Journal:  J Clin Microbiol       Date:  2015-04-15       Impact factor: 5.948

10.  Rapid detection of herpes simplex virus DNA in cerebrospinal fluid: comparison between loop-mediated isothermal amplification and real-time PCR.

Authors:  Hiroshi Kimura; Masaru Ihira; Yoshihiro Enomoto; Jun-ichi Kawada; Yoshinori Ito; Tsuneo Morishima; Tetsushi Yoshikawa; Yoshizo Asano
Journal:  Med Microbiol Immunol       Date:  2005-05-21       Impact factor: 3.402

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