Literature DB >> 25878344

Development and Validation of a Laboratory-Developed Multiplex Real-Time PCR Assay on the BD Max System for Detection of Herpes Simplex Virus and Varicella-Zoster Virus DNA in Various Clinical Specimens.

Sylvie Pillet1, Paul O Verhoeven1, Amélie Epercieux1, Thomas Bourlet1, Bruno Pozzetto2.   

Abstract

A multiplex real-time PCR (quantitative PCR [qPCR]) assay detecting herpes simplex virus (HSV) and varicella-zoster virus (VZV) DNA together with an internal control was developed on the BD Max platform combining automated DNA extraction and an open amplification procedure. Its performance was compared to those of PCR assays routinely used in the laboratory, namely, a laboratory-developed test for HSV DNA on the LightCycler instrument and a test using a commercial master mix for VZV DNA on the ABI7500fast system. Using a pool of negative cerebrospinal fluid (CSF) samples spiked with either calibrated controls for HSV-1 and VZV or dilutions of a clinical strain that was previously quantified for HSV-2, the empirical limit of detection of the BD Max assay was 195.65, 91.80, and 414.07 copies/ml for HSV-1, HSV-2, and VZV, respectively. All the samples from HSV and VZV DNA quality control panels (Quality Control for Molecular Diagnostics [QCMD], 2013, Glasgow, United Kingdom) were correctly identified by the BD Max assay. From 180 clinical specimens of various origins, 2 CSF samples were found invalid by the BD Max assay due to the absence of detection of the internal control; a concordance of 100% was observed between the BD Max assay and the corresponding routine tests. The BD Max assay detected the PCR signal 3 to 4 cycles earlier than did the routine methods. With results available within 2 h on a wide range of specimens, this sensitive and fully automated PCR assay exhibited the qualities required for detecting simultaneously HSV and VZV DNA on a routine basis.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 25878344      PMCID: PMC4432052          DOI: 10.1128/JCM.03692-14

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  47 in total

1.  Development, technical performance, and clinical evaluation of a NucliSens basic kit application for detection of enterovirus RNA in cerebrospinal fluid.

Authors:  Christine C Ginocchio; Frank Zhang; Amisha Malhotra; Ryhana Manji; Peter Sillekens; Helma Foolen; Marlieke Overdyk; Margot Peeters
Journal:  J Clin Microbiol       Date:  2005-06       Impact factor: 5.948

2.  Herpes zoster.

Authors:  Jeffrey I Cohen
Journal:  N Engl J Med       Date:  2013-10-31       Impact factor: 91.245

3.  Comparative evaluation of the Diagenode multiplex PCR assay on the BD max system versus a routine in-house assay for detection of Bordetella pertussis.

Authors:  Juliet Kenicer; Alison Hardie; Fiona Hamilton; Naomi Gadsby; Kate Templeton
Journal:  J Clin Microbiol       Date:  2014-04-30       Impact factor: 5.948

4.  Rapid and direct detection of herpes simplex virus in cerebrospinal fluid by use of a commercial real-time PCR assay.

Authors:  Matthew J Binnicker; Mark J Espy; Cole L Irish
Journal:  J Clin Microbiol       Date:  2014-10-01       Impact factor: 5.948

5.  A parallel diagnostic accuracy study of three molecular panels for the detection of bacterial gastroenteritis.

Authors:  J S Biswas; A Al-Ali; P Rajput; D Smith; S D Goldenberg
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2014-06-17       Impact factor: 3.267

6.  Development and optimization of a real-time PCR assay for detection of herpes simplex and varicella-zoster viruses in skin and mucosal lesions by use of the BD Max open system.

Authors:  Ana María Cárdenas; Paul H Edelstein; Kevin Alby
Journal:  J Clin Microbiol       Date:  2014-10-01       Impact factor: 5.948

7.  Clinical validation of the Lyra direct HSV 1+2/VZV assay for simultaneous detection and differentiation of three herpesviruses in cutaneous and mucocutaneous lesions.

Authors:  Feinan Fan; Jeffrey Stiles; Albina Mikhlina; Xuedong Lu; N Esther Babady; Yi-Wei Tang
Journal:  J Clin Microbiol       Date:  2014-07-30       Impact factor: 5.948

Review 8.  Light microscopy, culture, molecular, and serologic methods for detection of herpes simplex virus.

Authors:  Neil W Anderson; Blake W Buchan; Nathan A Ledeboer
Journal:  J Clin Microbiol       Date:  2013-10-16       Impact factor: 5.948

9.  Association between viral load of varicella zoster virus in cerebrospinal fluid and the clinical course of central nervous system infection.

Authors:  Amihai Rottenstreich; Zipi Kra Oz; Ilana Oren
Journal:  Diagn Microbiol Infect Dis       Date:  2014-03-01       Impact factor: 2.803

Review 10.  Diagnosis of genital herpes simplex virus infection in the clinical laboratory.

Authors:  Jérôme LeGoff; Hélène Péré; Laurent Bélec
Journal:  Virol J       Date:  2014-05-12       Impact factor: 4.099

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  11 in total

1.  Testing for Herpes Simplex Virus in Low-Volume Cerebrospinal Fluid Samples: Comparison of Three Protocols To Optimize Detection.

Authors:  Mark J Espy; Cole L Irish; Matthew J Binnicker
Journal:  J Clin Microbiol       Date:  2015-12       Impact factor: 5.948

2.  Development of a Real-Time PCR Protocol Requiring Minimal Handling for Detection of Vancomycin-Resistant Enterococci with the Fully Automated BD Max System.

Authors:  Alexander H Dalpke; Marjeta Hofko; Stefan Zimmermann
Journal:  J Clin Microbiol       Date:  2016-06-29       Impact factor: 5.948

3.  Combined testing for herpes simplex virus and Mycobacterium tuberculosis DNA in cerebrospinal fluid of patients with aseptic meningitis in Burkina Faso, West Africa.

Authors:  Sylvie Zida; Pratt Kolia-Diafouka; Dramane Kania; Albert Sotto; Vincent Foulongne; Karine Bolloré; Soumeya Ouangraoua; Nicolas Méda; Séverine Carrère-Kremer; Philippe Van de Perre; Edouard Tuaillon
Journal:  J Clin Lab Anal       Date:  2018-11-25       Impact factor: 2.352

4.  Anti-N-methyl-D-aspartate receptor encephalitis after Herpes simplex virus-associated encephalitis: an emerging disease with diagnosis and therapeutic challenges.

Authors:  Flora Schein; Amandine Gagneux-Brunon; Jean-Christophe Antoine; Sylvie Lavernhe; Sylvie Pillet; Stéphane Paul; Anne Frésard; Claire Boutet; Rémi Grange; Céline Cazorla; Frédéric Lucht; Elisabeth Botelho-Nevers
Journal:  Infection       Date:  2016-11-08       Impact factor: 3.553

5.  Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system.

Authors:  Talita T Rocchetti; Suzane Silbert; Alicia Gostnell; Carly Kubasek; Robert Jerris; Jennifer Vong; Raymond Widen
Journal:  Pract Lab Med       Date:  2018-05-24

6.  Validation of a Multiplex Real-Time PCR Assay for Detection of Mycobacterium spp., Mycobacterium tuberculosis Complex, and Mycobacterium avium Complex Directly from Clinical Samples by Use of the BD Max Open System.

Authors:  Talita T Rocchetti; Suzane Silbert; Alicia Gostnell; Carly Kubasek; Raymond Widen
Journal:  J Clin Microbiol       Date:  2016-03-23       Impact factor: 5.948

Review 7.  [Herpes zoster and postherpetic neuralgia].

Authors:  U Wollina; J Machetanz
Journal:  Hautarzt       Date:  2016-08       Impact factor: 0.751

8.  Evaluation of RealStar® Alpha Herpesvirus PCR Kit for Detection of HSV-1, HSV-2, and VZV in Clinical Specimens.

Authors:  Cyril C Y Yip; Siddharth Sridhar; Kit-Hang Leung; Andrew K W Cheng; Kwok-Hung Chan; Jasper F W Chan; Vincent C C Cheng; Kwok-Yung Yuen
Journal:  Biomed Res Int       Date:  2019-10-09       Impact factor: 3.411

9.  Implementation and Evaluation of a Fully Automated Multiplex Real-Time PCR Assay on the BD Max Platform to Detect and Differentiate Herpesviridae from Cerebrospinal Fluids.

Authors:  Thomas Köller; Daniel Kurze; Mirjam Lange; Martin Scherdin; Andreas Podbielski; Philipp Warnke
Journal:  PLoS One       Date:  2016-04-19       Impact factor: 3.240

10.  Optical Thickness-Encoded Suspension Array for High-Throughput Multiplexed Gene Detection.

Authors:  Huiying Ma; Xuejing Chen; Bangrong Lu; Yanhong Ji
Journal:  Sensors (Basel)       Date:  2019-12-09       Impact factor: 3.576

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