Literature DB >> 105722

The necessity of magnesium cation for acid assistance aglycone departure in catalysis by Escherichia coli (lacZ) beta-galactosidase.

M L Sinnott, S G Withers.   

Abstract

1. Removal of Mg2+ from Escherichia coli (lacZ) beta-galactosidase slightly increases the rate of hydrolysis of galactosyl pyridinium salts, but decreases the rate of hydrolysis of arylgalactosides. 2. Fair correlation of logkcat. and log (Km) with the pKa of aglycone is now observed for arglygalactosides, as well as for glycosyl pyridinium salts. 3. Degalactosylation of Mg2+-free enzyme is the rate-limiting step in the hydrolysis of 2,4-dinitrophenyl galactoside. 4. alpha-Deuterium kinetic isotope effects for both sets of substrates are consistent with the rate-determining generation of a glycosyl cation. 5. The pH-independent, SNl hydrolysis of 3,4-dinitrophenyl galactoside has been measured: it is as fast as that of the galactosyl 3-chloropyridinium ion. 6. Hydrolysis of these two substrates by Mg2+-free enzyme proceeds at very similar rates. 7. It is concluded that loss of both types of aglycone takes place, without acid catalysis, from the first ES complex of substrate and apoenzyme. 8. Data for galactosyl azide and thiopicrate confirm that neither charge nor change of atom is the cause of the differences in behavior between aryl galactosides and galactosylpyridinium salts.

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Year:  1978        PMID: 105722      PMCID: PMC1186101          DOI: 10.1042/bj1750539

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

1.  PURIFICATION, COMPOSITION, AND MOLECULAR WEIGHT OF THE BETA-GALACTOSIDASE OF ESCHERICHIA COLI K12.

Authors:  G R CRAVEN; E STEERS; C B ANFINSEN
Journal:  J Biol Chem       Date:  1965-06       Impact factor: 5.157

2.  Letter: On the mechanism of catalysis by carboxypeptidase A.

Authors:  R Breslow; D Wernick
Journal:  J Am Chem Soc       Date:  1976-01-07       Impact factor: 15.419

3.  High-level production of -galactosidase by Escherichia coli merodiploids.

Authors:  A V Fowler
Journal:  J Bacteriol       Date:  1972-11       Impact factor: 3.490

Review 4.  Physical organic models for the mechanism of lysozyme action.

Authors:  B M Dunn; T C Bruice
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1973

Review 5.  Active site directed inhibitors and mechanism of action of glycosidases.

Authors:  G Legler
Journal:  Mol Cell Biochem       Date:  1973-11-15       Impact factor: 3.396

6.  Nucleophilic competition in some -galactosidase-catalyzed reactions.

Authors:  O M Viratelle; J M Yon
Journal:  Eur J Biochem       Date:  1973-02-15

7.  Secondary isotope effect in the phosphorylase reaction.

Authors:  L M Firsov; T I Bogacheva; S E Bresler
Journal:  Eur J Biochem       Date:  1974-03-01

8.  Affinity labelling with a deaminatively generated carbonium ion. Kinetics and stoicheiometry of the alkylation of methionine-500 of the lacZ beta-galactosidase of Escherichia coli by beta-D-galactopyranosylmethyl-p-nitrophenyltriazene.

Authors:  M L Sinnott; P J Smith
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

9.  The beta-galactosidase-catalysed hydrolyses of beta-d-galactopyranosyl pyridium salts. Rate-limiting generation of an enzyme-bound galactopyranosyl cation in a process dependent only on aglycone acidity.

Authors:  M L Sinnott; S G Withers
Journal:  Biochem J       Date:  1974-12       Impact factor: 3.857

10.  The mechanism of action of beta-galactosidase. Effect of aglycone nature and -deuterium substitution on the hydrolysis of aryl galactosides.

Authors:  M L Sinnott; I J Souchard
Journal:  Biochem J       Date:  1973-05       Impact factor: 3.857

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  13 in total

1.  Antibacterial and antimembrane activities of cecropin A in Escherichia coli.

Authors:  L Silvestro; J N Weiser; P H Axelsen
Journal:  Antimicrob Agents Chemother       Date:  2000-03       Impact factor: 5.191

2.  High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.

Authors:  D H Juers; R H Jacobson; D Wigley; X J Zhang; R E Huber; D E Tronrud; B W Matthews
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

3.  Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli).

Authors:  Douglas H Juers; Beatrice Rob; Megan L Dugdale; Nastaron Rahimzadeh; Clarence Giang; Michelle Lee; Brian W Matthews; Reuben E Huber
Journal:  Protein Sci       Date:  2009-06       Impact factor: 6.725

4.  Larger increases in sensitivity to paracatalytic inactivation than in catalytic competence during experimental evolution of the second beta-galactosidase of Escherichia coli.

Authors:  S V Calugaru; S Krishnan; C J Chany; B G Hall; M L Sinnott
Journal:  Biochem J       Date:  1997-07-01       Impact factor: 3.857

5.  A solvent-isotope-effect study of proton transfer during catalysis by Escherichia coli (lacZ) beta-galactosidase.

Authors:  T Selwood; M L Sinnott
Journal:  Biochem J       Date:  1990-06-01       Impact factor: 3.857

Review 6.  LacZ β-galactosidase: structure and function of an enzyme of historical and molecular biological importance.

Authors:  Douglas H Juers; Brian W Matthews; Reuben E Huber
Journal:  Protein Sci       Date:  2012-11-13       Impact factor: 6.725

7.  The catalytic consequences of experimental evolution. Transition-state structure during catalysis by the evolved beta-galactosidases of Escherichia coli (ebg enzymes) changed by a single mutational event.

Authors:  B F Li; D Holdup; C A Morton; M L Sinnott
Journal:  Biochem J       Date:  1989-05-15       Impact factor: 3.857

8.  The catalytic consequences of experimental evolution. Studies on the subunit structure of the second (ebg) beta-galactosidase of Escherichia coli, and on catalysis by ebgab, an experimental evolvant containing two amino acid substitutions.

Authors:  A C Elliott; S K; M L Sinnott; P J Smith; J Bommuswamy; Z Guo; B G Hall; Y Zhang
Journal:  Biochem J       Date:  1992-02-15       Impact factor: 3.857

9.  Properties of beta-galactosidase III: implications for entry of galactosides into Klebsiella.

Authors:  B G Hall
Journal:  J Bacteriol       Date:  1980-05       Impact factor: 3.490

10.  Catalytic consequences of experimental evolution: catalysis by a 'third-generation' evolvant of the second beta-galactosidase of Escherichia coli, ebgabcde, and by ebgabcd, a 'second-generation' evolvant containing two supposedly 'kinetically silent' mutations.

Authors:  S Krishnan; B G Hall; M L Sinnott
Journal:  Biochem J       Date:  1995-12-15       Impact factor: 3.857

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