Literature DB >> 2505746

The catalytic consequences of experimental evolution. Transition-state structure during catalysis by the evolved beta-galactosidases of Escherichia coli (ebg enzymes) changed by a single mutational event.

B F Li1, D Holdup, C A Morton, M L Sinnott.   

Abstract

1. The first chemical step in the hydrolysis of galactosylpyridinium ions by the evolvant ebg enzyme is less sensitive to leaving-group acidity than in the case of the wild-type ebg enzyme, implying less glycone-aglycone-bond fission at the transition state. 2. The first chemical step in the hydrolysis of aryl galactosides by ebg enzyme is probably less sensitive to leaving-group acidity than in the case of ebg enzyme, possibly as a consequence of resulting in more effective proton donation to the leaving aglycone. 3. alpha-Deuterium kinetic isotope effects of 1.1(0) and beta-deuterium kinetic isotope effects of 1.0(0) were measured for the hydrolysis of galactosyl-enzyme intermediates derived from ebg and ebg enzymes: these effects are not compatible with reaction of the sugar ring through a 4C1-like conformation, or with an ionic glycosyl-enzyme intermediate. 4. The variation with pH of steady-state kinetic parameters for hydrolysis of p-nitrophenyl galactoside by ebg and ebg enzymes and of 3-methylphenyl beta-galactoside, 3,4-dinitrophenyl beta-galactoside and beta-galactosyl-3-bromopyridinium ion by ebg enzyme was measured. The steep, non-classical, fall in activity against p-nitrophenyl galactoside at low pH observed with ebg and ebg enzymes is not observed with ebg enzymes.

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Year:  1989        PMID: 2505746      PMCID: PMC1138632          DOI: 10.1042/bj2600109

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

1.  Regulation of newly evolved enzymes. II. The ebg repressor.

Authors:  B G Gall; D L Hartl
Journal:  Genetics       Date:  1975-11       Impact factor: 4.562

2.  Isolation and characterization of the newly evolved ebg beta-galactosidase of Escherichia coli K-12.

Authors:  J A Arraj; J H Campbell
Journal:  J Bacteriol       Date:  1975-11       Impact factor: 3.490

Review 3.  Recalibrated linkage map of Escherichia coli K-12.

Authors:  B J Bachmann; K B Low; A L Taylor
Journal:  Bacteriol Rev       Date:  1976-03

4.  Dependence upon pH of steady-state parameters for the beta-galactosidase-catalysed hydrolyses of beta-D-galactopyranosyl derivatives of different chemical types.

Authors:  S G Withers; M Jullien; M L Sinnott; O M Viratelle; J M Yon
Journal:  Eur J Biochem       Date:  1978-06-15

5.  Experimental evolution of a new enzymatic function. Kinetic analysis of the ancestral (ebg) and evolved (ebg) enzymes.

Authors:  B G Hall
Journal:  J Mol Biol       Date:  1976-10-15       Impact factor: 5.469

6.  Regulation of newly evolved enzymes. IV. Directed evolution of the Ebg repressor.

Authors:  B G Hall
Journal:  Genetics       Date:  1978-12       Impact factor: 4.562

7.  The necessity of magnesium cation for acid assistance aglycone departure in catalysis by Escherichia coli (lacZ) beta-galactosidase.

Authors:  M L Sinnott; S G Withers
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

8.  Evolution of a second gene for beta-galactosidase in Escherichia coli.

Authors:  J H Campbell; J A Lengyel; J Langridge
Journal:  Proc Natl Acad Sci U S A       Date:  1973-06       Impact factor: 11.205

9.  Regulation of newly evolved enzymes. I. Selection of a novel lactase regulated by lactose in Escherichia coli.

Authors:  B G Hall; D L Hartl
Journal:  Genetics       Date:  1974-03       Impact factor: 4.562

10.  Sequence of the ebgA gene of Escherichia coli: comparison with the lacZ gene.

Authors:  H W Stokes; P W Betts; B G Hall
Journal:  Mol Biol Evol       Date:  1985-11       Impact factor: 16.240

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  7 in total

1.  Larger increases in sensitivity to paracatalytic inactivation than in catalytic competence during experimental evolution of the second beta-galactosidase of Escherichia coli.

Authors:  S V Calugaru; S Krishnan; C J Chany; B G Hall; M L Sinnott
Journal:  Biochem J       Date:  1997-07-01       Impact factor: 3.857

2.  The catalytic consequences of experimental evolution. Studies on the subunit structure of the second (ebg) beta-galactosidase of Escherichia coli, and on catalysis by ebgab, an experimental evolvant containing two amino acid substitutions.

Authors:  A C Elliott; S K; M L Sinnott; P J Smith; J Bommuswamy; Z Guo; B G Hall; Y Zhang
Journal:  Biochem J       Date:  1992-02-15       Impact factor: 3.857

Review 3.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12

4.  Large changes of transition-state structure during experimental evolution of an enzyme.

Authors:  K Srinivasan; A Konstantinidis; M L Sinnott; B G Hall
Journal:  Biochem J       Date:  1993-04-01       Impact factor: 3.857

5.  Catalytic consequences of experimental evolution: catalysis by a 'third-generation' evolvant of the second beta-galactosidase of Escherichia coli, ebgabcde, and by ebgabcd, a 'second-generation' evolvant containing two supposedly 'kinetically silent' mutations.

Authors:  S Krishnan; B G Hall; M L Sinnott
Journal:  Biochem J       Date:  1995-12-15       Impact factor: 3.857

6.  beta-deuterium kinetic isotope effects in the purine nucleoside phosphorylase reaction.

Authors:  X M Guo; M Ashwell; M L Sinnott; T A Krenitsky
Journal:  Biochem J       Date:  1991-09-01       Impact factor: 3.857

7.  Catalysis by the large subunit of the second beta-galactosidase of Escherichia coli in the absence of the small subunit.

Authors:  S V Calugaru; B G Hall; M L Sinnott
Journal:  Biochem J       Date:  1995-11-15       Impact factor: 3.857

  7 in total

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