Literature DB >> 4462753

The beta-galactosidase-catalysed hydrolyses of beta-d-galactopyranosyl pyridium salts. Rate-limiting generation of an enzyme-bound galactopyranosyl cation in a process dependent only on aglycone acidity.

M L Sinnott, S G Withers.   

Abstract

1. beta-d-Galactopyranosyl pyridinium salts are well-behaved substrates for the beta-galactosidase of Escherichia coli, catalysis occurring by the interaction of the salt itself with the normal active site of the protein. 2. logk(cat.) values for seven such salts show a linear relationship (correlation coefficient=-0.997) with the pK(a) of the parent pyridine. 3. The beta-d-galactopyranosyl derivatives of pyridine and 4-bromoisoquinoline exhibit alpha-deuterium kinetic isotope effects of 1.136+/-0.040 and 1.187+/-0.046 on their enzymic hydrolysis, indicating formation of a galactopyranosyl cation in the rate-limiting step. 4. This behaviour of the pyridinium salts contrasts with the behaviour of aryl galactosides and this contrast can be accommodated by the beta-galactosidase mechanism of Sinnott & Souchard (1973). 5. The alpha-deuterium kinetic isotope effect for the hydrolysis of beta-d-galactopyranosyl azide is 1.098+/-0.033; comparison of the k(cat.) value of the azide with that of a pyridinium salt of the same aglycone pK(a) enables a maximum factor of 70 to be ascribed to the acceleration of the departure of azide by intracomplex general acid catalysis. 6. The possibility of the rate-limiting process in the glycosidase-catalysed hydrolysis of aryl glycosides being a conformation change is considered for a number of glycosidases where correlations of k(cat.) with aglycone acidity, reported in the literature, have been unsuccessful.

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Year:  1974        PMID: 4462753      PMCID: PMC1168444          DOI: 10.1042/bj1430751

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  21 in total

1.  Galactosidases.

Authors:  K WALLENFELS; O P MALHOTRA
Journal:  Adv Carbohydr Chem       Date:  1961

2.  pH dependence of the activity of beta-galactosidase from Escherichia coli.

Authors:  J P Tenu; O M Viratelle; J Garnier; J Yon
Journal:  Eur J Biochem       Date:  1971-06-11

3.  Studies of catalysis by -glucuronidase. The effect of structure on the rate of hydrolysis of substituted phenyl- -d-glucopyranosiduronic acids.

Authors:  C C Wang; O Touster
Journal:  J Biol Chem       Date:  1972-05-10       Impact factor: 5.157

4.  Application of secondary alpha-deuterium kinetic isotope effects to studies of enzyme catalysis. Glycoside hydrolysis by lysozyme and beta-glucosidase.

Authors:  F W Dahlquist; T Rand-Meir; M A Raftery
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

5.  On the inhibition of beta-N-acetyl-D-glucosaminidase by 2-acetamido-2-deoxy-D-glucono-(1-5)-lactone.

Authors:  D H Leaback
Journal:  Biochem Biophys Res Commun       Date:  1968-09-30       Impact factor: 3.575

6.  The mechanism of glycosidase action.

Authors:  B Capon
Journal:  Biochimie       Date:  1971       Impact factor: 4.079

7.  Substituent effect on the hydrolyses of phenyl -maltosides catalyzed by saccharifying -amylase from Bacillus subtilis.

Authors:  N Suetsugu; K Hiromi; S Ono
Journal:  J Biochem       Date:  1971-10       Impact factor: 3.387

8.  -galactosidase-catalysed hydrolysis of -D-galactopyranosyl azide.

Authors:  M L Sinnott
Journal:  Biochem J       Date:  1971-12       Impact factor: 3.857

9.  The hydrolysis of glycosyl fluorides by glycosidases.

Authors:  J E Barnett; W T Jarvis; K A Munday
Journal:  Biochem J       Date:  1967-11       Impact factor: 3.857

10.  [Contributions to the enzymatic, acid and alkaline cleavage of beta-D-thioglucosides of mercapto-pi-lack-heterocyclics and of beta-D-thioglucosides and beta-D-selenoglucosides of nitrothiophenols and nitroselenophenols].

Authors:  G Wagner; R Metzner
Journal:  Pharmazie       Date:  1965-12       Impact factor: 1.267

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  11 in total

Review 1.  LacZ β-galactosidase: structure and function of an enzyme of historical and molecular biological importance.

Authors:  Douglas H Juers; Brian W Matthews; Reuben E Huber
Journal:  Protein Sci       Date:  2012-11-13       Impact factor: 6.725

2.  Interaction of the lacZ beta-galactosidase of Escherichia coli with some beta-D-galactopyranoside competitive inhibitors.

Authors:  R S Loeffler; M L Sinnott; B D Sykes; S G Withers
Journal:  Biochem J       Date:  1979-01-01       Impact factor: 3.857

3.  Affinity labelling with a deaminatively generated carbonium ion. Kinetics and stoicheiometry of the alkylation of methionine-500 of the lacZ beta-galactosidase of Escherichia coli by beta-D-galactopyranosylmethyl-p-nitrophenyltriazene.

Authors:  M L Sinnott; P J Smith
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

4.  The necessity of magnesium cation for acid assistance aglycone departure in catalysis by Escherichia coli (lacZ) beta-galactosidase.

Authors:  M L Sinnott; S G Withers
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

5.  Large changes of transition-state structure during experimental evolution of an enzyme.

Authors:  K Srinivasan; A Konstantinidis; M L Sinnott; B G Hall
Journal:  Biochem J       Date:  1993-04-01       Impact factor: 3.857

6.  Purification and mechanistic properties of an extracellular alpha-L-arabinofuranosidase from Monilinia fructigena.

Authors:  M A Kelly; M L Sinnott; M Herrchen
Journal:  Biochem J       Date:  1987-08-01       Impact factor: 3.857

7.  Investigation of alpha-deuterium kinetic isotope effects on the purine nucleoside phosphorylase reaction by the equilibrium-perturbation technique.

Authors:  P K Lehikoinen; M L Sinnott; T A Krenitsky
Journal:  Biochem J       Date:  1989-01-15       Impact factor: 3.857

8.  Structure-Reactivity Relationships for β-Galactosidase (Escherichia coli, lac Z): A Second Derivative Effect on β(nuc) for Addition of Alkyl Alcohols to an Oxocarbenium Ion Reaction Intermediate.

Authors:  John P Richard; Christina K Heo; Maria M Toteva
Journal:  J Phys Org Chem       Date:  2008-07-01       Impact factor: 2.391

9.  Effects of deuterium substitution alpha and beta to the reaction centre, 18O substitution in the leaving group, and aglycone acidity on hydrolyses of aryl glucosides and glucosyl pyridinium ions by yeast alpha-glucosidase. A probable failure of the antiperiplanar-lone-pair hypothesis in glycosidase catalysis.

Authors:  L Hosie; M L Sinnott
Journal:  Biochem J       Date:  1985-03-01       Impact factor: 3.857

10.  Binding energy and catalysis. Fluorinated and deoxygenated glycosides as mechanistic probes of Escherichia coli (lacZ) beta-galactosidase.

Authors:  J D McCarter; M J Adam; S G Withers
Journal:  Biochem J       Date:  1992-09-15       Impact factor: 3.857

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